Gene CPF_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0400 
Symbol 
ID4201470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp481103 
End bp482293 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content30% 
IMG OID638081284 
Productputative glucuronyl hydrolase 
Protein accessionYP_694857 
Protein GI110798842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAGG AAATAAGAGT TGAAGAGATT GCAAAGAAAG ATGAATTTCT GAAAACTAAG 
TTATTAACTA GAGCTGAGGT TAAAAATGCT ATTGATTTAG TTATAAAACA AATAGATGCT
AATATGGAAT ATTTCAAAGA AAAATTTCCA TCATCAGCAA CAAAAAATAA TCAGTATGGA
ATTATAGAAA ATATAGAGTG GACTGATGGA TTCTGGACAG GCTTATTATG GCTTGCTTAT
GAGTACACAG GAGATGAAAA ATATAGAGAG TTAGCAGATA AAAATGTTGC ATCTTTTAAA
AACAGAGTGG AAAAAGATAT AGAATTAGAT CATCATGATT TAGGATTCTT ATATTCATTA
GCTACAGTAA GTGGTTATAA ATTAACAGGC TCTGAGGATG CAAGAGAAGC TTCAATAAAA
GCTGCAAATA AACTTATTTC TAGATACCAA GAAAAAGGTG AGTTTATTCA AGCTTGGGGA
GAGCTAGGTA GCAAAGATCA CTACAGATTT ATAATAGATT GTTTATTAAA TATACCATTA
TTATACTGGG CTAGTGATGA AACAGGAGAT GCAAAGTATA GAAACATAGC AAATAAACAT
TTTGTTACAT CTTGTAATAA TGTTATAAGA GATGATGCAT CTGCATTCCA TACATTCTAT
ATGGATAATG AAACTGGAAA ACCTTTAAGA GGAGTTACTA GACAAGGATA TAGTGATGAT
TCAGCTTGGG CTAGAGGACA AGCTTGGGGA GTTTATGGTA TTCCATTAAA TTATAGATAT
ACAAGAAATG AAAGTTGTTT TAATCTTTAT GAGGGGATGA CTAATTATTT CTTAAATAGA
TTACCTAAGG ATAACGTTTG TTATTGGGAT TTGATTTTCA ATGATGGTGA TGATCATTCA
AAGGATTCTT CAGCAGCAGC AATAGCTGTT TGTGGTATGC ATGAAATGAA TAAATATTTA
CCAGAAGTTG ACGAAAATAA AGAAGTATAT AAATATGCAA TGCATAATAT TTTAAGATCA
TTAATGGAAA ATTATATGAA TCCTGAAATA GAACCTGGAA AACCGGTTTT ATTACATGGA
GTATATTCAT GGCATTCAGG AAAAGGTGTA GATGAAGGAA ACATATGGGG AGATTATTTC
TTCTTAGAAG CCTTAATAAG ATTTTATAAA GATTGGAACC TTTATTGGTA A
 
Protein sequence
MIKEIRVEEI AKKDEFLKTK LLTRAEVKNA IDLVIKQIDA NMEYFKEKFP SSATKNNQYG 
IIENIEWTDG FWTGLLWLAY EYTGDEKYRE LADKNVASFK NRVEKDIELD HHDLGFLYSL
ATVSGYKLTG SEDAREASIK AANKLISRYQ EKGEFIQAWG ELGSKDHYRF IIDCLLNIPL
LYWASDETGD AKYRNIANKH FVTSCNNVIR DDASAFHTFY MDNETGKPLR GVTRQGYSDD
SAWARGQAWG VYGIPLNYRY TRNESCFNLY EGMTNYFLNR LPKDNVCYWD LIFNDGDDHS
KDSSAAAIAV CGMHEMNKYL PEVDENKEVY KYAMHNILRS LMENYMNPEI EPGKPVLLHG
VYSWHSGKGV DEGNIWGDYF FLEALIRFYK DWNLYW