Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0332 |
Symbol | |
ID | 4203447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 395893 |
End bp | 396303 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638081219 |
Product | hypothetical protein |
Protein accession | YP_694792 |
Protein GI | 110799860 |
COG category | [S] Function unknown |
COG ID | [COG3877] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00335254 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATATAA AAGGAGGTGT TTTTTTGAGA TACGTAAGAC CAAGCAAATG TCCAGTGTGT AATAGTGAAC TAAAAATAGT TAAATTAGAA TGTGAAAAAT GCAAAACTAA AATTGAAGGT GAATTTAAGG GCTGTGATTT TTGTAATTTA ACTCCAGAAG AGCAATATTT TCTAAAGATA TTTGTTAAGT GCAAAGGAAG TATAAAAGAA ATAGAAAAAG AACTAGATAT ATCCTATCCA ACTGTAAAGA GTAGATTAAA TCAATTAATA ACAGCTTTAG GGTTTGAAGA TAAAGAATTA GAAGATGAAA AAAAGGATAA AAAAAGGGAG AGAGAGATTA TACTTGGAAA GCTAGATAGA GGAGAAATAA CATCTAGTGA AGCTTTAAAG GAATTAGAGA AATTAAAATA A
|
Protein sequence | MYIKGGVFLR YVRPSKCPVC NSELKIVKLE CEKCKTKIEG EFKGCDFCNL TPEEQYFLKI FVKCKGSIKE IEKELDISYP TVKSRLNQLI TALGFEDKEL EDEKKDKKRE REIILGKLDR GEITSSEALK ELEKLK
|
| |