Gene CPF_0268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0268 
Symbol 
ID4201685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp324213 
End bp325646 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content25% 
IMG OID638081155 
Productglycosyl transferase, group 1 family protein 
Protein accessionYP_694729 
Protein GI110798632 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATA TTTTTGAAGT TATGTTAAAA AAGAATATTG GAGATTTTAC ATATGAAGAG 
AAAAGGGAAT TAAATAACTG GCTTATAGAA AATTTAAAGC TTAAAGAACT TATATATTCT
GGATTAGAAC TTACTAAAGT TATTAATGAG GATGGGGAAG AAACAGCATA CTATGAGAAT
AAAATAACCG AAGAAGATAT TTTATCAGGA AATTTCAATG AATTATGTTC TAAGACATCT
AAATATATAG ATGATGCTAT AAGCTCAATA TTATTTGAGG GACAATTTAA TTGTTTTTAT
GAAAAGATTA AAAGCATATT GGAATTAGAA GACTTTGATG AAATTATTGT TTTTCATGCT
TCCTTTGGAT GGAATATAGA AATGAAGCAA AGACCTCAAC ATTTAGCAGA GGCATTAAGT
AAAAAGAAAG TATTATATAT ATATAGAAGC GATGTAAAAA ATGATAACAT TTATTCAATT
AAAAAGATAA AGGACAATTT ATATGTTCTT AATTTAGATA TGTATAGTTT AAATGTGGCA
TTTTTTGAGG CAATAAAATC AATTAATAAG CCTAAATTTG TACATGTTTA TGCTACATGT
TTAAACTCAG TTGATTACGA AAAGATAAAA ACATATATGG ATAAAGGCTT TAAAGTCATA
TATGATTTTG TAGACGAGTT ATCTAGTGAA ATAAGTGGAT ATAACATAAC TTCTAAAATG
ATAGAGGATC ATGAAAAACT CTTGAGAGAT AAAGAAAATG TATTAGTTGT TTCAACTGCA
AAAAAATTAA AAGATATTGC AAATAAATTT AGGGGAGAAA ATGAAAATAA TATTTTAGCT
CCTAATGCTG TTAATTTAGA AGACTTTAAA AATCATGGAA ATGAAATAGG TGAAAAAATT
CAGCCTATAG TTAATAAGAG AAAGCCTATA ATAGGTTATT ATGGAGCTTT AGCTAAGTGG
TTTGATTATA AATTAATTGA GCAATTAGCA AAGGAAAGAG AAGATTACGA AATAGTTTTA
ATAGGAATGG ATTATGATGG GTCTTATGAT CAAAGTAATC TAAAAGATTA TTCAAATATA
TCTTATCTTG GTATGATTGA TTATAAAGAT TTAATAAACT ATTCAAGATA TTTTGATGTA
TGTATTGTAC CTTTTATAAA AAATGATATA ACTGATTCTA CATCACCATT AAAAATATTT
GAGTATATGG CTTTAGAAAA GCCCATAGTA ACTACTGATA TAAATGAGTG TAAAAATTAT
GAATCTTGTT TGATTTCAAA GGATTATGAT GAATTTATAA GAAATATTGA TAAGGCATTA
AAGCTAGAAG TAGATAACAA AGAATATTTT AATATCTTAA GAAGAGAAGC TGAAGAAAAT
ACCTGGGATA ATAGAGCTGA ATTAATAAAA GAGGCTATTA AAAACCTAGA ATAA
 
Protein sequence
MSNIFEVMLK KNIGDFTYEE KRELNNWLIE NLKLKELIYS GLELTKVINE DGEETAYYEN 
KITEEDILSG NFNELCSKTS KYIDDAISSI LFEGQFNCFY EKIKSILELE DFDEIIVFHA
SFGWNIEMKQ RPQHLAEALS KKKVLYIYRS DVKNDNIYSI KKIKDNLYVL NLDMYSLNVA
FFEAIKSINK PKFVHVYATC LNSVDYEKIK TYMDKGFKVI YDFVDELSSE ISGYNITSKM
IEDHEKLLRD KENVLVVSTA KKLKDIANKF RGENENNILA PNAVNLEDFK NHGNEIGEKI
QPIVNKRKPI IGYYGALAKW FDYKLIEQLA KEREDYEIVL IGMDYDGSYD QSNLKDYSNI
SYLGMIDYKD LINYSRYFDV CIVPFIKNDI TDSTSPLKIF EYMALEKPIV TTDINECKNY
ESCLISKDYD EFIRNIDKAL KLEVDNKEYF NILRREAEEN TWDNRAELIK EAIKNLE