Gene CPF_0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0244 
Symbol 
ID4202128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp295409 
End bp296731 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content29% 
IMG OID638081128 
Productputative lipoprotein 
Protein accessionYP_694706 
Protein GI110798897 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.482265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATA ATAAAAAAAT AAGTTTAAGT ATTGTTTTAG CATCATTAAT TACAGTTTCT 
TTAGTTTCTT GTGGAAGTAG TTCAGTAAAG GAGGATTCAA CGGCTTCAAA GACAAAATTA
GAAGAAAAAG CTGATGGAAA AGTTCAATAT GGATTAGAAG AGTTAAACTG GGACCCTGAT
AATTATAAGG CATTAGTAAA TGTTATAAAG GAATATGGAA AGGATAGTAA AAATTATGAT
GAAAATCAAA AGCCTTATGC TGTTTTTGAT TGGGATAATA CAACAATAAT GAATGATGTT
GAAGAAGCAT TACTTGCTTA TCAGTTGATG AATTTAGAAT TTAAAATGAC GCCTGAAGAA
TTGGATACTG TTATGAAAAC TAATATTCCA AAGGATAACT TTGTTGAGAA ATGCAATAAT
AAAGAGGGAA AGCCTGTTAA TATTGATTTA ATTACAGAGG ATATTGTTAG TGATTATACA
TATCTATATG AAAATTATAA AGGTTTTAAA GGAAATAAAT CCTTGGATGA AATAAAAAAA
GAAAAAGAGT ATGAGGATTT TAAAGCAAAA CTTAGATATC TTTATAGTGC AATTGGAGAA
TCATTTAGTT CAGATGTAAG TTATCCATGG GTAACTTATT TGTTTAAAGG AATGACTTCT
GAGGAGGTTG CTAAACTTAC TGAAAAGTCT AATGATTACT GGTTAAATGA AAAGTTAGGT
GTTGAAACGT GGACTAGTAG TGAAGAGATT CCAGGAAAAG CAGGAATTGT TTCTGTTACA
TTTGATACAG GATTAAGAAC TATTAAAGAA CAACAAAATT TATATAAAAC TTTAATGAAA
AATGGTATTG ATGTTTATGT ATGCTCAGCT TCTTACATTG ACGTTGTTAG GGAATTTGCA
ACAAATCCTA AGTACGGATA TGAATTACCA TCTAAAAATA TATATGCTAT GGAACTTTTA
AAAACAGATG ATGGTAAAAT AAAGGCTGAA CTAAATCCAG AGTATTATCA AACTCAAGGA
AAAGGTAAGA CAGAAACTAT TAAAAAATTT TTAGTTCCAA CTCATAATAA AGGCCCTGTA
ATCACTGGAG GAGATAGTAA TGGTGACTAT TATATGCTAT CAGATTTTGA TGATACAAAG
GTTAGCTTAA TTATAAATAG ATGTAAAGGT GGAAAGATTG GTGAGCTTTG TGATAAAGCC
ATTGAAACTA TGGGAAAATC TGATGAAAGA TATTTTTTAC AAGGTAGAAA TAATAATACC
GGTGAATTTA TTCCAAGTGA AAAAACAATA TTATTAGGAG AAGATACTGA GAAACTTAAA
TAA
 
Protein sequence
MKNNKKISLS IVLASLITVS LVSCGSSSVK EDSTASKTKL EEKADGKVQY GLEELNWDPD 
NYKALVNVIK EYGKDSKNYD ENQKPYAVFD WDNTTIMNDV EEALLAYQLM NLEFKMTPEE
LDTVMKTNIP KDNFVEKCNN KEGKPVNIDL ITEDIVSDYT YLYENYKGFK GNKSLDEIKK
EKEYEDFKAK LRYLYSAIGE SFSSDVSYPW VTYLFKGMTS EEVAKLTEKS NDYWLNEKLG
VETWTSSEEI PGKAGIVSVT FDTGLRTIKE QQNLYKTLMK NGIDVYVCSA SYIDVVREFA
TNPKYGYELP SKNIYAMELL KTDDGKIKAE LNPEYYQTQG KGKTETIKKF LVPTHNKGPV
ITGGDSNGDY YMLSDFDDTK VSLIINRCKG GKIGELCDKA IETMGKSDER YFLQGRNNNT
GEFIPSEKTI LLGEDTEKLK