Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0177 |
Symbol | nanE |
ID | 4201411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 211176 |
End bp | 211841 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638081058 |
Product | N-acetylmannosamine-6-phosphate 2-epimerase |
Protein accession | YP_694641 |
Protein GI | 110800735 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3010] Putative N-acetylmannosamine-6-phosphate epimerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAGACG TGGTAAAAGG AAATTTAATA GTTTCTTGCC AAGCTTTATC AGATGAACCT TTGCATAGTT CTTTTATTAT GGGAAGGATG GCTATAGCAG CTAAGCAAGG TGGAGCAGCG GCCATAAGAG CACAAGGCGT TAATGATATT AATGAAATAA AAGAAGTTAC TAAACTTCCT ATCATTGGAA TAATAAAAAG AAATTACGAT GATTCAGAAA TTTATATAAC TCCAACTATG AAGGAAGTGG ACGAGCTTTT AAAAACAGAT TGTGAAATGA TAGCATTAGA TGCTACAAAG AGAAAAAGAC CTAATGGTGA AAATGTAAAG GATTTAGTTG ATGCTATTCA CGCAAAAGGA AGATTAGCAA TGGCTGATAT ATCAACTTTA GAAGAAGGTA TTGAAGCAGA AAAATTAGGA TTTGATTGTG TATCTACAAC ACTTTCAGGA TATACACCAT ATTCTAAGCA AAGCAACAGT GTTGACTTTG AACTTTTAGA AGAGTTAGTA AAAACGGTAA AAATTCCAGT TATTTGTGAG GGAAGAATAA ACACTCCAGA AGAACTAAAG AAAGCACTTG ATTTAGGTGC ATATTCAGCA GTGGTTGGAG GGGCTATAAC AAGACCACAA CAAATAACTA AGAGATTTAC TGATATTTTA AAATAA
|
Protein sequence | MLDVVKGNLI VSCQALSDEP LHSSFIMGRM AIAAKQGGAA AIRAQGVNDI NEIKEVTKLP IIGIIKRNYD DSEIYITPTM KEVDELLKTD CEMIALDATK RKRPNGENVK DLVDAIHAKG RLAMADISTL EEGIEAEKLG FDCVSTTLSG YTPYSKQSNS VDFELLEELV KTVKIPVICE GRINTPEELK KALDLGAYSA VVGGAITRPQ QITKRFTDIL K
|
| |