| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0123 |
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| Symbol | |
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| ID | 4202970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 147208 |
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| End bp | 149112 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638081004 |
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| Product | cell wall surface anchor family protein |
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| Protein accession | YP_694587 |
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| Protein GI | 110800193 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4932] Predicted outer membrane protein |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC GAAAATTATT AATAATGATA GGATTAGCAA CTAGTATATT TACTTTAGAG
GCTTTACCTA TGGGGTTACC AGTTGCAAAT TCAACTGTTT ATGCTGCAGA ACAAATTGCG
CCTACTACTC AAAATTTATC TGTTCAAAAA GTAATGTATG AAGGGGTAAA GCCATCTATT
ACAAATGATG GAGAAGAAAA GCAATTGCCA GTTGGAGCAG AAAAATTTAA TCCTGAAAAG
TATGGTGATG TAAAGTTTAC ATTAGTTGAT ATAACATCAT ACTTTAATAA TAAGGGAGAA
AAAGGAATTC AAGAAGAATT AAATGGATTA ACAGCAGAAC AATATTCTGA TTGGATAAAT
ACTCATAAAG AAGCAAATAC TACACCGGTT ACACACTCTG TAAATACTGA GGGTAAGGTT
AATTACGATA ATGTTTTAGC CACTAATAAA GATGGAACAG GACATGTTTA CGCTATATTA
GAAACAAAAA GTGCAAAAGG ATTAATTGAA CAAATTGCTC AACCTATTGT TGTTAGTTTA
CCTATGACAA ATGTTGTTGG AAATGGTTGG CTTAATACAA TAAACTTATA TCCTAAAAAT
AAAGTAAAAT CATTATCATT TAAATTAACA AAGTATGGTG AAGAAATTTC AGATACTAAT
AAATTAGCTG ATGCCACATT TGATATTTAT TCTGGGGTTC CTGGAAGTGG AACTAAGTTA
AACAAAGATG TTTTAACAAC TAATAAAGAT GGTGTTATTA CAGTAGATAA TTTAACTAAA
GGAGATTATT ATTTCGTGGA AACAAGTGCT CCTAAAAACT ATGTTATAGG ATCAAATGCA
TTAAATGATA ACAATAATAA ATTAAAATTT TCTATTGGAG ATGATGGGGT AGATAAAAAT
TCTTTACATA TTGAGTTTAT AAACTACTTA AAACCAGAGA GCAATAAAGA GGTAACTAAT
GGAACAGCTC CTCGTACTAA TGAATCAAGT TTTACAATTG GAGATACAGT AGACTATGAA
AATACTATTC GTGTTCCTAA AGATATTGCA GGTGGAAAAA TTGTAAATGG TGATAATACA
GAAACTACTT CAGCTTATTC AGTGTTTAAT TACAAAGATA TAGCCGGAAC TGGATTATCT
TATTTTGGAC AAGCTAAGGA TGTAAATATT ACTACTCAAG ATGGAACTAA ATTAGAGTTA
AACACAGATT ATACTTACGA AGGATTACAA AATGGTTTTA AAATTAATTT CATCATGAAT
AATGGAAAAG TAAGTGCTAA AGTTGCTAGT TTAGCAGGAC AAAACTTAAA AGTTAGTTAT
CCAATGATAT TAAACGATAA GGCCTTAATT GATGGTCCTG TAGAAAATAG TTTTGATTTA
TCTTGGAATA ATAGTCCAAA TCCTGATAGT AAAGTAAATC ATGAAACTGG AAAAGTGCCT
GTATTTACTG GTGGAGCAAA ATTTGTTAAA CAAGATAAAT CAAGTAAGGC AGCTTTAAAA
GGAGCGAAGT TCGTAATAAT GAACAAAGAA GGAAAATACT TCGATGGATG GGAAGATGCT
AATAATGATG GAGTAAAAGA TGCTAAGTGG TCAGATACAC AACCTACAAG TGGAGAAGGT
GTATTTGTTT CAGGTGATAA TGGTCAATTC TTAATAAAAG GATTAGCTTA TGGAACTTAT
AAATTAAAAG AAATTGAAGC TCCAGAGGGA TATCAATTAT TAACCAATAC TCAAGAATTT
GAAATTAGCA AAGATACTTA TTCTGGTGGA TTTAGTACAA TTACAAATAC TAAGAAATCA
GCTATGCCAC TTACTGGTTC TACACAATTA ATTGTTACTG TGTTAGCTGG TGCTGTACTT
ATAGTTTCAT CAGGTGTTTA TTACAGAAAA CGTAAAATGA ATTAA
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| Protein sequence | MKKRKLLIMI GLATSIFTLE ALPMGLPVAN STVYAAEQIA PTTQNLSVQK VMYEGVKPSI
TNDGEEKQLP VGAEKFNPEK YGDVKFTLVD ITSYFNNKGE KGIQEELNGL TAEQYSDWIN
THKEANTTPV THSVNTEGKV NYDNVLATNK DGTGHVYAIL ETKSAKGLIE QIAQPIVVSL
PMTNVVGNGW LNTINLYPKN KVKSLSFKLT KYGEEISDTN KLADATFDIY SGVPGSGTKL
NKDVLTTNKD GVITVDNLTK GDYYFVETSA PKNYVIGSNA LNDNNNKLKF SIGDDGVDKN
SLHIEFINYL KPESNKEVTN GTAPRTNESS FTIGDTVDYE NTIRVPKDIA GGKIVNGDNT
ETTSAYSVFN YKDIAGTGLS YFGQAKDVNI TTQDGTKLEL NTDYTYEGLQ NGFKINFIMN
NGKVSAKVAS LAGQNLKVSY PMILNDKALI DGPVENSFDL SWNNSPNPDS KVNHETGKVP
VFTGGAKFVK QDKSSKAALK GAKFVIMNKE GKYFDGWEDA NNDGVKDAKW SDTQPTSGEG
VFVSGDNGQF LIKGLAYGTY KLKEIEAPEG YQLLTNTQEF EISKDTYSGG FSTITNTKKS
AMPLTGSTQL IVTVLAGAVL IVSSGVYYRK RKMN
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