| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0119 |
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| Symbol | |
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| ID | 4201977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 139147 |
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| End bp | 141174 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 638081000 |
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| Product | putative ABC transporter, permease protein |
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| Protein accession | YP_694583 |
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| Protein GI | 110800368 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.086048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTTTA AGTTAGCCTT TAAAAATATA AAAAAGAGTT ATAAAAATTA TGTAATATAT
TTTTTAACCT TGATATTTGG AATATGTATA TTTTATACTT TTAATTCCAT AGAGTCACAA
AGTGTAATGA TGGAACTTAA TGAGCAAAAG CAGTCAGCCT TTATGATGGC AGAACAATTA
ATGGGATATT TCTCTGTATT TATAGCTTTT GTCTTAGGAT TTTTAATAGT TTATGCAAAT
AATTATCTAA TAAAAAGAAG AAAAAAAGAG TTTGGAATTT ATATGACTCT TGGAATGGAA
AATGGAAGCT TATCAAAAAT GATATTCTTA GAAACTCTAT TTATAGGGGC TATATCTCTA
GGAATAGGAG TGGTACTAGG AATAATGTTA TCTCAAGCAC TTTCAGTACT TACAGCCTAT
ATGTTCCAGG TAGACCTTAC AAAGTTTCAA TTTGTTTTTT CTCCCCTTGG ATTTAAGAGA
ACAGTACTTT GTTTTTCAAT AATATATCTT GTTGTATTAA TTTTTAACTT TATAAGTGTT
AGAAAGATTA AATTAATAGA TTTATTAACA GCTTCAAAGA GAAATGAAAA TCCTACTATT
AAAAACTTAT GGGTATCAGT AATATTATTT TTAGTTAGTG TGGGAATATT AGTAACAGCT
TATTATAAGG TCATACATGA TGGAATTGCC TTTGCTAGTT TTAATGCTCT TGGATTACCA
ATTTTACTAG GATGTATTGG AACATTTATA TTCTTTTACT CTTTAACAGG ATTCTTTTTA
AAGGTTATTC AAGGAAATAA AAAATTCTAT TTAAGAGATT TAAACATGTT TGTTATGAAG
CAAATAAGCA GTAAAATAAA CACAACCTTT GTATCCTTAT CATTTATATG TTTAATGTTA
TTTTTAGCTA TTTGTACATT TTCAGGAGGG TTAGGTATAA ATAGGGCTAT AAATGCTGAC
TTAAAAGATT TAACTAAATT TGATGTTACC TTTTGGAGTA ATAGTGGTGA AAATATAGAA
AAACTTTTGA AGGAAAAAAA TATTGATATA TCTAATATAG CTAAAGAAGA TTCAAACATG
GTTATGTATG ATAGTGAAGT TAAATACAGT AATTTCTTAT CAAAAGAGGG AATGACTGCT
ATGAAGAACT ATTTTCCAGT AGCTAATGAT AATGACATAT TAGTAATTGG AGAAAAGGGA
TATAATAATA CATTAAAACT TCTTGGGAAA GAGCCTGTTA ATTTAAAGGA AAATCAATAC
TTAGCAGTTG GAAATATTGA TGAAATGAAA AAGTGGGTTA ATGAGAGCTT AGAAAATGGA
AATATGGATC AAATGAAAAA GTTGGTTAAT AAGAGCTCAG AAAATGGAAA GAAGATAAAT
ATTTCAGGAA AAACCTTAGA GCCTGCAAAT AAAAAGTATG AAAATATTAA TCTATATAAT
TTTACTATGA AAGGTGATAT TTTAATTTTT GTTGTTAAGG ATTCTCTCCT TGAAGGATTA
AAACCTGTGT CTAGTAGATT TAATATGATG CTAAAGGATA ACTCTAATAC AAAGGAAGAA
TTAGAGAGCA TAAGAGATCA GCTAGTAGAA AGTCAGGTTT ATTCAATAAC AAAAAAAGAA
ATATATGATA ATGCAGCTGG TCTAGGTGCA ACAATGGCTT ACTTGGGAAT ATACCTAGGT
TTAATATTTA TAATTACATC AGCAGTTGTA CTTGCTATTC AGCAGCTTAC AGAATCTACT
GATAATGTAG AAAGATATAG ATTATTAAAA GAAATAGGTG TGGATCAAAA GATGATAAAT
AAAGCTATAT TCACTCAAGT AGGAGTATAT TTTATGCTTC CTTTATCACT TGCTATAGTA
CATTCAATAG TTGGTTTAAA GATATCTTCT ACCATAGTAG GAGTATTTGG AAATGCTAGT
ATAATGCCAA ATATAATTAT AACAGCAATA ATTTTTGTTA TAATTTATGG AGGGTACTTC
TTAGCAACAT ATTTAGGGGC TAAGAAAAAC ATAAATGAAA GATCATAG
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| Protein sequence | MYFKLAFKNI KKSYKNYVIY FLTLIFGICI FYTFNSIESQ SVMMELNEQK QSAFMMAEQL
MGYFSVFIAF VLGFLIVYAN NYLIKRRKKE FGIYMTLGME NGSLSKMIFL ETLFIGAISL
GIGVVLGIML SQALSVLTAY MFQVDLTKFQ FVFSPLGFKR TVLCFSIIYL VVLIFNFISV
RKIKLIDLLT ASKRNENPTI KNLWVSVILF LVSVGILVTA YYKVIHDGIA FASFNALGLP
ILLGCIGTFI FFYSLTGFFL KVIQGNKKFY LRDLNMFVMK QISSKINTTF VSLSFICLML
FLAICTFSGG LGINRAINAD LKDLTKFDVT FWSNSGENIE KLLKEKNIDI SNIAKEDSNM
VMYDSEVKYS NFLSKEGMTA MKNYFPVAND NDILVIGEKG YNNTLKLLGK EPVNLKENQY
LAVGNIDEMK KWVNESLENG NMDQMKKLVN KSSENGKKIN ISGKTLEPAN KKYENINLYN
FTMKGDILIF VVKDSLLEGL KPVSSRFNMM LKDNSNTKEE LESIRDQLVE SQVYSITKKE
IYDNAAGLGA TMAYLGIYLG LIFIITSAVV LAIQQLTEST DNVERYRLLK EIGVDQKMIN
KAIFTQVGVY FMLPLSLAIV HSIVGLKISS TIVGVFGNAS IMPNIIITAI IFVIIYGGYF
LATYLGAKKN INERS
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