| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0115 |
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| Symbol | |
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| ID | 4202046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 135917 |
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| End bp | 136597 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638080996 |
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| Product | DNA-binding response regulator |
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| Protein accession | YP_694579 |
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| Protein GI | 110800417 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0388834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAGCA AAAAGATTTT TATTATAGAA GATGAAGAAA AGATAAGAGA AGAGCTTACT
AAATTTTTAG AGAAGTATGG CTACATTGTA GAGTCATCAG AAGACTTTGA AAATATAGTT
GATACTTCAT TAAGATGTAA TCCTAATATG ATTTTACTAG ATATAAATCT CCCTTATTAT
GATGGTTACT ATATTTGCAG GGAGATAAGG AAGAAAAGCC AAGTTCCAAT TATAGTTGTA
ACTAGTAGAC AAAGTGAGAT GGATGAGCTT ATGAGTATGA ATTTAGGGGC TGATGACTTT
GTTACTAAGC CTTATAATAC TCAAATACTT TTAGCTAGAA TTGCATCAAT TATGAAAAGA
ACCTATTCAG GAATTGAGGG TGAAACAGAA ATATTTAATT GCAGAGAATT AAAATATAAT
ATGTCTACTA GCGAGGTTTC ATTTAAGGGG GAAGTTGAGG AGCTTACTAA AAATGAAAGT
AAGATTTTAA ATATTCTAAT AAGAAATAAA GGGAAAATAG TATCAAGAGA TAATATTATA
AAGTCTTTAT GGCAAAGTAA TGAGTTTATA GATGATAATA CCTTAACTGT TAATGTAAAT
AGACTTAGAA GAAAGATTGA AGGAATAGGG GCAGAGGGAT ATTTACAAAC TAAGAGGGGG
CAAGGGTATA TATTATCATG A
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| Protein sequence | MESKKIFIIE DEEKIREELT KFLEKYGYIV ESSEDFENIV DTSLRCNPNM ILLDINLPYY
DGYYICREIR KKSQVPIIVV TSRQSEMDEL MSMNLGADDF VTKPYNTQIL LARIASIMKR
TYSGIEGETE IFNCRELKYN MSTSEVSFKG EVEELTKNES KILNILIRNK GKIVSRDNII
KSLWQSNEFI DDNTLTVNVN RLRRKIEGIG AEGYLQTKRG QGYILS
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