Gene CPF_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0083 
Symbol 
ID4201695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp98545 
End bp99312 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content33% 
IMG OID638080964 
Productputative myo-inositol catabolism protein IolB 
Protein accessionYP_694547 
Protein GI110798642 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3718] Uncharacterized enzyme involved in inositol metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGAAA ATATAGGTTT TTCAGAAGAT GGGAAAAAGA TTGTTACAGA GATTAATGGT 
AAGCATAGCA GTATGCTAAT GGATATAGAA GTTATAAAAA TGAAAAAAGG TAATAAAATA
GTAATTTTAG AACCTAAAAA GGAAGTTGCA GTACTTCTTA TGGAAGGTAA AATAAAATAC
CTTTGGGAAA ATAAAGAGGT TGAAGCTAGC AGAAAAAATG TATTTGAAGA AGAGGGATTT
TGTCTACATG TTTGCAAGAA TGTAGAAGTT AAAGTTGAGG CATTAGAAGA GGCTGAGATA
TTAATTCAAA AAGCTGAAAA TGATAAAGAA TTCTTAGCTA AGCTGTATAG ACCTGAGGAT
GTAATAATCC AAGAATCATC TTTAGATAAA TGGGATGGAA CTGCAGCTCG TAAGATAAAA
ACATTCTTTG ATTACAGTAA TGCACCATAT TCAAATATGG TTAATGGGGA AATAGTTTCT
TATCCAGGAA GATGGTCAAG CTATATTCCA CATGAACATC CACAACCAGA AGTTTATTAT
TATAAATTTG ATAAGCCACA AGGATTTGGA GCTTGCTTTA TAGGCGATGA AGCTTACAAA
GTTAAAGATG GTGGATATGC AATAATAGAA GGTGGATATA CACACCCACA AGCTACTGCT
CCAGGATATA GAATGTATTA TTGTTGGATG ATAAGACATT TAGATGGAAA CCCTTGGACA
GATAGAATTG ATGATCCAGC TCATGTTTGG TTATTAGATG AAAAATAG
 
Protein sequence
MVENIGFSED GKKIVTEING KHSSMLMDIE VIKMKKGNKI VILEPKKEVA VLLMEGKIKY 
LWENKEVEAS RKNVFEEEGF CLHVCKNVEV KVEALEEAEI LIQKAENDKE FLAKLYRPED
VIIQESSLDK WDGTAARKIK TFFDYSNAPY SNMVNGEIVS YPGRWSSYIP HEHPQPEVYY
YKFDKPQGFG ACFIGDEAYK VKDGGYAIIE GGYTHPQATA PGYRMYYCWM IRHLDGNPWT
DRIDDPAHVW LLDEK