Gene CHU_3844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3844 
Symbol 
ID4184199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4430172 
End bp4430951 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content37% 
IMG OID638073831 
Productpolysaccharide export periplasmic protein 
Protein accessionYP_680419 
Protein GI110640209 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TAGTAGTTTT TGCAGCCATA GTTTGTATAA TAAGTATGAT CGCATCTTGT 
AAATCATACC ACGATTACAA GATGTTTCAG ACCGATACCA GTATTCTGGT AGATTCAGTT
GAACGCTTAA GAAACAAAGC CACGAGTGAA TATAAAATTG AAATCAATGA TGTAATTACA
CTTGACATTT ATACAAACAA TGGTGAAAAG CTTGTTGACC CCAATAATGC GTTAACAGAT
GGACAAAAAA CAGCTAAAGA ACAGCCTGCC GTAATTAAAT ACACCATCTA TTCAGATGGC
TGTGCGCACC TGCCTATGGT TGGAAATATT GTTTTAAAAG GCTTTACGGT GTATCAGGCA
GACAGTATAC TCACCATTGC TTTTGCAAAG TATTATACCG AACCGTATGT TAAGACCACA
TTATTAAGTA AGCGGGTAAT CGTGTTTGGT CCGGACGGCG GTAAAATCAT TCCATTGGAA
TATCAGAACA TGAATCTTGT TGAAATTATT GCCCGGTATG GAGGTATACG CATAGATGGA
AAGGCAACAA ATATCCGCGT ATTGAGAGGA GATTTAAGAA ATCCCGATGT ACAGCTGATC
AATTTAAATA CTGTTGAAGG AATGAAGCTC GCATACATGG ACATGGAACC TGGCGATATT
GTGTACATAG AGCCAAGCAG AAAAGTATTT AAAGAAGTCC TTTCAGATGT ATATCCGCTT
GTAGGTATTA CAACAAGTGT GGCAACATTG TATTTGATCA TTAAAACGAG TACAAACTAA
 
Protein sequence
MKKIVVFAAI VCIISMIASC KSYHDYKMFQ TDTSILVDSV ERLRNKATSE YKIEINDVIT 
LDIYTNNGEK LVDPNNALTD GQKTAKEQPA VIKYTIYSDG CAHLPMVGNI VLKGFTVYQA
DSILTIAFAK YYTEPYVKTT LLSKRVIVFG PDGGKIIPLE YQNMNLVEII ARYGGIRIDG
KATNIRVLRG DLRNPDVQLI NLNTVEGMKL AYMDMEPGDI VYIEPSRKVF KEVLSDVYPL
VGITTSVATL YLIIKTSTN