Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3844 |
Symbol | |
ID | 4184199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4430172 |
End bp | 4430951 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638073831 |
Product | polysaccharide export periplasmic protein |
Protein accession | YP_680419 |
Protein GI | 110640209 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TAGTAGTTTT TGCAGCCATA GTTTGTATAA TAAGTATGAT CGCATCTTGT AAATCATACC ACGATTACAA GATGTTTCAG ACCGATACCA GTATTCTGGT AGATTCAGTT GAACGCTTAA GAAACAAAGC CACGAGTGAA TATAAAATTG AAATCAATGA TGTAATTACA CTTGACATTT ATACAAACAA TGGTGAAAAG CTTGTTGACC CCAATAATGC GTTAACAGAT GGACAAAAAA CAGCTAAAGA ACAGCCTGCC GTAATTAAAT ACACCATCTA TTCAGATGGC TGTGCGCACC TGCCTATGGT TGGAAATATT GTTTTAAAAG GCTTTACGGT GTATCAGGCA GACAGTATAC TCACCATTGC TTTTGCAAAG TATTATACCG AACCGTATGT TAAGACCACA TTATTAAGTA AGCGGGTAAT CGTGTTTGGT CCGGACGGCG GTAAAATCAT TCCATTGGAA TATCAGAACA TGAATCTTGT TGAAATTATT GCCCGGTATG GAGGTATACG CATAGATGGA AAGGCAACAA ATATCCGCGT ATTGAGAGGA GATTTAAGAA ATCCCGATGT ACAGCTGATC AATTTAAATA CTGTTGAAGG AATGAAGCTC GCATACATGG ACATGGAACC TGGCGATATT GTGTACATAG AGCCAAGCAG AAAAGTATTT AAAGAAGTCC TTTCAGATGT ATATCCGCTT GTAGGTATTA CAACAAGTGT GGCAACATTG TATTTGATCA TTAAAACGAG TACAAACTAA
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Protein sequence | MKKIVVFAAI VCIISMIASC KSYHDYKMFQ TDTSILVDSV ERLRNKATSE YKIEINDVIT LDIYTNNGEK LVDPNNALTD GQKTAKEQPA VIKYTIYSDG CAHLPMVGNI VLKGFTVYQA DSILTIAFAK YYTEPYVKTT LLSKRVIVFG PDGGKIIPLE YQNMNLVEII ARYGGIRIDG KATNIRVLRG DLRNPDVQLI NLNTVEGMKL AYMDMEPGDI VYIEPSRKVF KEVLSDVYPL VGITTSVATL YLIIKTSTN
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