Gene CHU_3790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3790 
Symbol 
ID4184126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4381268 
End bp4381798 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content39% 
IMG OID638073776 
Producthypothetical protein 
Protein accessionYP_680365 
Protein GI110640155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0977946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC TTAAGAAAAT TTTAATCGGT CTTGCCGTAT TCATTGCATT ACTATTGCTT 
ATAGCAGTAT TTATTCCGAC AACCTATACC GTATCTGTAT CAACGACTAT TCATAAACCG
CAGCAGGAAG TATATGACTA TGTTAAACAG ATTAAAAATC AGGAAAACTA CAGCATCTGG
GTAATGCAGG ATACAAATGT AGTAATGACG TATACAGGTA CAGATGGCAC GGTTGGCTTT
ATTGCAAACT GGAATAGCAA AGATGATAAT GTTGGGGAAG GCGAACAGGA GATCACGAAA
GTTGATGGGG AACGTGTAGA TGTGGACCTG CGTTTCAAAC GCCCGTTTGA AGGACAATCC
AAAGCAGCAA CAATTGTGAA AGCAGTCTCT GCGAATGAAA CACAGGTAAC GAGTGAGTTT
TACGGACATA ATCCATACCC TACAAACTTA ATGTGTTTTG TTGGAAAAAT GTTTATCAAA
GACGCACAAA CGCAGAATAT GGCCAACCTG AAAGCCATTC TGGAAAAATA A
 
Protein sequence
MKILKKILIG LAVFIALLLL IAVFIPTTYT VSVSTTIHKP QQEVYDYVKQ IKNQENYSIW 
VMQDTNVVMT YTGTDGTVGF IANWNSKDDN VGEGEQEITK VDGERVDVDL RFKRPFEGQS
KAATIVKAVS ANETQVTSEF YGHNPYPTNL MCFVGKMFIK DAQTQNMANL KAILEK