| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3775 |
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| Symbol | |
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| ID | 4183797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 4362208 |
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| End bp | 4365021 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638073761 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_680350 |
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| Protein GI | 110640140 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC TATTTGTACT TTTCTTTTTA CTGGCTCCGG TTACAGCATT TTCCCAGCTT
CCTAAAATCC CGGGGTCAAT TGGCGGCGTT TCCACCTCTG CTATTCTTAC TAAAACAAAA
AATGCACTCG TTACGCAATT AGATAAAAGC AAAGCCGAAT ACGACACCAC TAGTTTTAAT
TATGCCATTT CACTCAGCGA CAATGCGGGT TTATATGAAA ACGAAGAAAA ATGGCTGCGC
AATCAAAAGA TGTTTTCAGA TGTGTTAAGG CAAAGTGATG GATCTTCCTT AACGCCTTTA
CAAAAAGCGG AAGAAAACAA TGAAGTTGGG GAAATGATGT ACGCTTCCAA CAAATTCAAT
GCGGCCGAAA ATACTTTTTT AAGTTCAAAG CTCATTTATG AAAGTAATGG ACTAACCGCT
GAAGCAGGCT ACAGCAAAGT ACTTGCAAAT ATCGGCTTGT TGTATCATAC CATGGGCCGG
TATTCGAAAG CAGAAGAATT TGACAAGCTG GCTATTGATA TTCGTAAAAC ACAATCCGGC
GAATCCAGTG TTGCTTATGG TTCATCTGTA AATAATCTGG GTGTTTTATA TAAAGATTTG
GGCAAATATA CCGAAGCAGA AAAACTGCTG GAAAAGGCCA TTCAATTGAA TGCAATCAAT
CCGGGAAAGC AATCGCCTGC TTATGCCATT ACATTAAATA ACCAGGCCAT GCTCTTTGAA
GAAATGGGGC GTTTTCAGCA GGCTGATCAG TTATTGGCAG AAGCAATACG AATTGCGTCT
GCGGAAATGA CTGAAAAATC AACGAACTAT CAGCGCCTGC TGATCAACCA GGCCTTGCTG
TATGAGGAAA TGGGCTCTTA TTCCAAAGCA GATGAGATCT ATAAAAAGGC CATCGCCATT
AAAGAAAAAC GTTTAGGCAG CAGCCACCCC GATTATGCGC ATTTATTAAA TCTACAGGCC
GAACTATATA TGCAGATGAA CAAAACTTCA GAAGTAGAGT CGTTATTAAA AAAATCAGCA
GATATTTATT TGAAAAAATT CGGTGCCAAT CACCCATCTT ATGCAGGTGT ATTGCAGAAT
TTAGGAAATT ACTACAGAAC ACAGGATCAG CAGCCGGCCG CTTATACAAA CCTTACAAAA
GCACTCTCCA TACGTATTGC AGCTCTTGGT GAAAACCATC CGGATGTTTT GCAGACTAAA
GAATGCATTG CCTTGCTGGA TTGGCAGGCA AAAAAATATT CCGTAGCATC ATCCGGTTTT
CAAACGGTAC TGGATCAGAA TATGCTTTTG ATCAATGAAT ATTTTGCAGC TCTCAGTGAT
GCCGAAAAAG CGCGTTTCTG GGATAAAATG CATCCGCACT TTGATCATTA TGCAGCTTTT
GTTGCCGATA CGTATAAAGA GCTGCCAGCG CTGACAGGAC AATTATATAC CTATCAGCTG
GCAACAAAAG CATTGTTATT AAATGCTGCA AACAAAACCC GCCAACAGAT ATTAAGCAGC
GGAGACGCTT CTTTAATTAA AGAATATCAG GAATGGCTGG ATGCTAAAGA AAGTCTTTCA
CGGTTATACA GCATGTCAAA ATCTGAACTG GCTGAACAGC GTATTAATTT AGATTCGATT
GAACGTTCAG CTAATTCAAA AGAAAAAAAT CTTTCTGCCC ATTCAGCAGT TTTTAAATCC
GGTTATACAA ACGCACCTGT AACGTGGAAA AATATACAGC TTGCCCTGGG TACGGATGAT
GCGGCTGTCG AAATCATACA CATTACAAAA TTTGATAAAA TTAAAACGGA TACTATTTAT
TATGGTGCGT TGGTGCTTAC AAAAGAAATG AGCCTGCCAG CATTCGTTTT ACTAAAGAAC
GGCAACCAGC TCGAAAAAAA ATACCTGGCC TATTATAGAA ATTCGATTAA AAATAAACTC
GCCGATGTGT ATTCGTATAC ACAGTACTGG GAAGAGATTG ATAAAAAGAC CAGTGGTAAA
AAATCCATCT TCGTATCTAT GGATGGTGTA TACAGCCAAT TAAATATCAG CACACTGAGA
TTTTCTGATG GAACGTATTT ACTGGATAAA AAAAATATTC AGCTTATTTC CAATTCAAAA
GATATTATTA AACTTAAAAC TGCCGCAGCT TCTACTGCAG CTGCAAGTGC CGTATTGATT
GGTAATCCTG TCTTTGGAAC TGCCGGAAGT ATCGCTCCGC TTCCGGGAAC AAAGGTTGAA
ATTGAATCAG TCAAAACACA GCTTACAGCA AAAGGATATA AGGTTACAAC GTATGTTCAG
AATGAAGCTT CGGAACAGAA TATCCGTAAA GTATCTAATC CTAAAATTTT ACATATAGCT
ACCCATGGAT TTTTTATTGC CGAAACACAA GGTGAGGACA AAACGATGGG CATTGGTTCG
GAACATTCCG CGCTGAATCC TATGCTGCGT TCAGGGCTGC TGTTGGCAAA TGCGGAAGCG
ACAATTGATG CCAACGCCGA GTATGGCGTA TTAACCGCTT ATGAAGTAAT GAATCTGAAT
TTAGACAAAA CAGAAATTGT AGTTATGAGC GCCTGTGAAA CGGGCCTGGG AGATGTAAAA
AATGGCGAAG GTGTATATGG GCTGCAGCGT GCATTTCTTG TAGCAGGAGC AGATGCATTA
ATTATGAGCT TGTGGAAAGT AAATGATGAA GCAACTCAAA AATTAATGAC CAGCTTTTAT
AAAAATTATC TGGTATTAGC AGATAAACAA AAAGCGTTTA AGGCTGCTCA GGCGGAATTA
AAAACCCTTT ACAAGGAACC GTATTACTGG GGAGCGTTTG TATTGATTCA GTAA
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| Protein sequence | MNKLFVLFFL LAPVTAFSQL PKIPGSIGGV STSAILTKTK NALVTQLDKS KAEYDTTSFN
YAISLSDNAG LYENEEKWLR NQKMFSDVLR QSDGSSLTPL QKAEENNEVG EMMYASNKFN
AAENTFLSSK LIYESNGLTA EAGYSKVLAN IGLLYHTMGR YSKAEEFDKL AIDIRKTQSG
ESSVAYGSSV NNLGVLYKDL GKYTEAEKLL EKAIQLNAIN PGKQSPAYAI TLNNQAMLFE
EMGRFQQADQ LLAEAIRIAS AEMTEKSTNY QRLLINQALL YEEMGSYSKA DEIYKKAIAI
KEKRLGSSHP DYAHLLNLQA ELYMQMNKTS EVESLLKKSA DIYLKKFGAN HPSYAGVLQN
LGNYYRTQDQ QPAAYTNLTK ALSIRIAALG ENHPDVLQTK ECIALLDWQA KKYSVASSGF
QTVLDQNMLL INEYFAALSD AEKARFWDKM HPHFDHYAAF VADTYKELPA LTGQLYTYQL
ATKALLLNAA NKTRQQILSS GDASLIKEYQ EWLDAKESLS RLYSMSKSEL AEQRINLDSI
ERSANSKEKN LSAHSAVFKS GYTNAPVTWK NIQLALGTDD AAVEIIHITK FDKIKTDTIY
YGALVLTKEM SLPAFVLLKN GNQLEKKYLA YYRNSIKNKL ADVYSYTQYW EEIDKKTSGK
KSIFVSMDGV YSQLNISTLR FSDGTYLLDK KNIQLISNSK DIIKLKTAAA STAAASAVLI
GNPVFGTAGS IAPLPGTKVE IESVKTQLTA KGYKVTTYVQ NEASEQNIRK VSNPKILHIA
THGFFIAETQ GEDKTMGIGS EHSALNPMLR SGLLLANAEA TIDANAEYGV LTAYEVMNLN
LDKTEIVVMS ACETGLGDVK NGEGVYGLQR AFLVAGADAL IMSLWKVNDE ATQKLMTSFY
KNYLVLADKQ KAFKAAQAEL KTLYKEPYYW GAFVLIQ
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