Gene CHU_3753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3753 
Symbol 
ID4186727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4341118 
End bp4342299 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content36% 
IMG OID638073740 
Producthypothetical protein 
Protein accessionYP_680329 
Protein GI110640119 
COG category[S] Function unknown 
COG ID[COG4339] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATG AATCAATCAT AAAGCACGCG GAAAAATATG TTCGTAAGCT GTACGCAGAA 
GCAGAGAAAG ATCTTTATTA TCATAATTTA GAACATACGG AGCATACTGT AAAGGCTGCT
GAAGAAATTG CTACGCATTA TAAACTGAAC GAAGAAGACC ACACAGCAGT GCTTGTTGCT
GCCTGGTTGC ATGATATAGG GTATATTATT TCCGGAAGAG ATAATCATGA AGAAGCTTCT
GTGAAAGCAG CGAAAGAGCT GATGCTGAAA AATGATGTGC CGCAGCGGTT GATAGATAAA
GTTGAAGGGT GCATACTCGC TACAAAAATG CCGCAAAATC CTTCAAATTT ATTAGAAGAA
ATTATTTGCG ATGCAGACCT CTATGATTTA GGCACAGAGC ATTTTAAAAA CAACAACAAA
AAGGTTCGCA AAGAGGTAGA AGCATTTTTA GGAAAAGAAC TTACAGGTTC AGAATGGCGG
ACATTTTCAT TGATCTTTTT AAAAAAGCAA GTGTACAAAA CAGCCTACTG TAAACAACTA
TTACAGCCTG GCCTTGAAAA AAATATTCAG GTGATCGTTG AAAAGCAAGT AGAAAAAGAT
ATGGAGATTC CAAAGAAAGA AAAAAATAAA GACGATCAAA GTAAAGAAAA GGAAAAGGTA
AACAGAGGTG TAGAAACCAT GTTTCGTACA ACATCAACCA ACCACTTACG ATTAAGTGAA
ATGGCTGACA ACAAAGCGAA CATTATGATT ACCGTTAACT CCATTATTAT ATCGGTATTA
TTAACGGTAT TGTTTCGCAA ACTGGATACA GATCCGCGCT TTTTAATTCC AACCATGCTG
TTATTATTTA CATCTCTTGT AACAATTATT TTTTCAATTT TTGTTACGCG GCCAAACGTT
ACCAGCGGCA TTTTCAGTAA AGAAGACATT GAAAAGAAAC GCGCGAATTT ATTGTTCTTC
GGAAATTTTT ATAAAATGAA AATTGAAGAT TACGAGTGGG GTATTCAGCA AGTAATGAAA
GATCCGGAAT TTTTATATGG AAGTATGACG CGTGATATTT ATCACCTTGG TGTAGTTTTA
GGAAGAAAAT ATAAAATGCT GCGCATTGCA TACAGCTTCT TTATGTTTGG ATTTATTATT
TCAGTATTAT CCTTTGTATT TGTTGTTGTC CCGGTGAAGT AA
 
Protein sequence
MQDESIIKHA EKYVRKLYAE AEKDLYYHNL EHTEHTVKAA EEIATHYKLN EEDHTAVLVA 
AWLHDIGYII SGRDNHEEAS VKAAKELMLK NDVPQRLIDK VEGCILATKM PQNPSNLLEE
IICDADLYDL GTEHFKNNNK KVRKEVEAFL GKELTGSEWR TFSLIFLKKQ VYKTAYCKQL
LQPGLEKNIQ VIVEKQVEKD MEIPKKEKNK DDQSKEKEKV NRGVETMFRT TSTNHLRLSE
MADNKANIMI TVNSIIISVL LTVLFRKLDT DPRFLIPTML LLFTSLVTII FSIFVTRPNV
TSGIFSKEDI EKKRANLLFF GNFYKMKIED YEWGIQQVMK DPEFLYGSMT RDIYHLGVVL
GRKYKMLRIA YSFFMFGFII SVLSFVFVVV PVK