| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3732 |
|---|
| Symbol | |
|---|
| ID | 4185113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 4312077 |
|---|
| End bp | 4313291 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638073719 |
|---|
| Product | outer membrane protein |
|---|
| Protein accession | YP_680308 |
|---|
| Protein GI | 110640098 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAT TTGCACTCGT TACGCTGGCG TCATTTATGT TATCGGCGTT CACATCACAA
GCACAGGATT CTACTAAAAC AGGAAAATTA ACCATCTCTG GATATGTTGA TATGTATTAT
CAATACAATT TCAATAATCC AACCCGTGAA GTTGGTTTGT TTCAATCAAC TACAGCGGAT
GGTGATGGTG TAGAAAACCT TGGGCGTATC TTTGATGTTA AAAACAATAC ATTCTCATTA
GGTTTAGCTC AAACAAAATT TGCATATACA ACAGACAGAT CAGAAGTAGT AGTTGATTTG
ACATATGGCC CGAATTCACT TTTAGGTAAC TTCGGTAACG TAATTGGCGG TAATGATTTA
ATGATCAAGC AGGCATATAT GTCTTATATG TTTACAGATA AATTGAATGT TACAGTAGGT
CAGTTTGGTA CACATATCGG TTATGAATTG ATTGATGCTC CCTTGAACTA TAACTATTCA
CTTTCTTACC TATTCGGTAA CGGTCCGTTC TACCACACAG GTGCTAAAGC ATCGTATGCC
TTCTCAGAAA GCTTCGGTAT TATGGCCGGT GTTGTAAATG GCTGGGATGC GATGTATGAT
TTCAACGGTA CAAAATCTGC AATTGCTCAG ATCTACGTTG CTCCGACAGA TGGCTTTAAT
ATTTATGTAA ACTACATCGG CGGTGATGAA AGAAACGGTT TGTCCTTCCC AACATTAGCC
GCTACTGCAA CATCAGCAAA AACAGTTTCG CACTTATTTG ATTTAACTAC TACATACCAA
TTGTCTGATG CCTTCAAATT AGGCTTGAAT GCAGCATACG GTTTCGGCAG CAACTTAAAA
ATAGATGCTA CGCAGGATGA TGGTTATGCT AAAGGTTCTT GGGGTGGTGC AGCGTTGTAT
GCTGACTACA GATTCTCTGA GTTCTTTGGC TTAGGTTTAC GTGCTGAACA CTTCATCGAT
AAAGATGGTC TGAGATATAT CTCAAGCACA TTCGGTCAGG GCTGCACAGT TAGCGAATTC
ACTTTAACAG GTGATATGAA ATTTATGGAT GGCCACTTCA ACCTGAAGCC TGAATTCAGA
ATTGATGTTG CAAATGTGAA TGATGACATG GGCGGAACAT ACAAAGGTTA TGTATCTAAC
CCAGGCAATC CGGACAAAGC TAAAGCTACA AATATTCAGC CTACACTTGG AATGGCTGCT
ATCTATGCAT TCTAA
|
|---|
| Protein sequence | MKKFALVTLA SFMLSAFTSQ AQDSTKTGKL TISGYVDMYY QYNFNNPTRE VGLFQSTTAD
GDGVENLGRI FDVKNNTFSL GLAQTKFAYT TDRSEVVVDL TYGPNSLLGN FGNVIGGNDL
MIKQAYMSYM FTDKLNVTVG QFGTHIGYEL IDAPLNYNYS LSYLFGNGPF YHTGAKASYA
FSESFGIMAG VVNGWDAMYD FNGTKSAIAQ IYVAPTDGFN IYVNYIGGDE RNGLSFPTLA
ATATSAKTVS HLFDLTTTYQ LSDAFKLGLN AAYGFGSNLK IDATQDDGYA KGSWGGAALY
ADYRFSEFFG LGLRAEHFID KDGLRYISST FGQGCTVSEF TLTGDMKFMD GHFNLKPEFR
IDVANVNDDM GGTYKGYVSN PGNPDKAKAT NIQPTLGMAA IYAF
|
|---|
| |