Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3723 |
Symbol | |
ID | 4184501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4297423 |
End bp | 4298709 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638073710 |
Product | major facilitator superfamily permease |
Protein accession | YP_680299 |
Protein GI | 110640089 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGAATA AAAAAACATT AGCAATTTTA TTAACGGCAA ATGGTGTATC AAGCTTTGCA CAAGGCTTTA CCATGATGTC AATACCTTAT TATTTCAATA AGATAGATAA TTATTCTTTT TTTAGCTTAA GCTTAACAAT AATCACCTTA GCTTCTTTAT TCTGGGCACT TTACGCAGGT TCTATTATTG ATGGTTTCAA CCGTAAAGAT GTATTTCTGG GCACCAATTT CGTTGGCGGT ATTGTTATTC TTTCTATTGC TTCATTAGGC TTCAAAGAAG GAAGTTTAAC CAATATATTG ATAATAATGG TATATGCACT TACCATGTTT GGATATGTTA TTCACTACCC GAACCTCTAT GCCTTTTCCC AGGAATTATC AAAGCCAAAA GATTACACGA AAATAACATC TTTAATTGAA ATTGTTGGCC AATCAACCGT AATGGGTTCT GCAATTATGG GTACCATGTT ACTGAAAGGG ATGGATGATT TTCAGATTCC GTTTACTCAG ATACATTTAA CATTGGAAAG ATGGGAAATA CATGAAATCT TTTTATTCGA TGCAATCGCC TATTTTGTTT CTTTTCTTAT CATTTTATTG ATCAAGTATT CGCCAAATAT GAAACTTGTT ATTTCAGATG AAGGTACATT GTACGAACGT CTCAAAACCG GTTATATGTA TTTGCGCAAC AATCAGCTCG TTGCTTTATT CGGAATCTGT TCGTTTGTAA TATTTATCGT TGTCTACATC GAGCAGTTTG CTTTAATGAC ACCATACGTT TTGAATCACT TAAAAGAAGA TGCTCCGGTA TTGGGATTAA CAGAATTGAT GTATGGCCTT GGTGCATTAT TCTCCGGAGT AATCATTCAG ACTTTATTCA GTAAAATGCC CGTGCTTAAA GCGGTAGTGT TATTAACGTT TGCAACCGGC GCTATATTTT TACTAAGCTC TCTTACATGC GCCGTGATCA TATTTATCAA TGTGGCGTTC CTGAAAGGAT TTACAAACGC CGGTTCACGT ATTTTCAGAG TTACGTATTT GTTTTCGCTC ATTCCAAACG AATTGGCAGG TAGAGTAAAC AGTTTCTTTA ACGTAATGAA TACAGTATTC AGATTGATTT TCTTGTCCAT CTTTACATTG CCATTTTTCA TGGACGGCTC CAATATCGTT TATGCATATG GAATACTGGC TGTATTCTGT TTTATTGCAG GAATTGTATT ACTGGTCTAT TACAAGCAAT TCTCAAAACT TACTGAATCC ATACCTTCAC ACGATGAAGA GCATTGA
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Protein sequence | MTNKKTLAIL LTANGVSSFA QGFTMMSIPY YFNKIDNYSF FSLSLTIITL ASLFWALYAG SIIDGFNRKD VFLGTNFVGG IVILSIASLG FKEGSLTNIL IIMVYALTMF GYVIHYPNLY AFSQELSKPK DYTKITSLIE IVGQSTVMGS AIMGTMLLKG MDDFQIPFTQ IHLTLERWEI HEIFLFDAIA YFVSFLIILL IKYSPNMKLV ISDEGTLYER LKTGYMYLRN NQLVALFGIC SFVIFIVVYI EQFALMTPYV LNHLKEDAPV LGLTELMYGL GALFSGVIIQ TLFSKMPVLK AVVLLTFATG AIFLLSSLTC AVIIFINVAF LKGFTNAGSR IFRVTYLFSL IPNELAGRVN SFFNVMNTVF RLIFLSIFTL PFFMDGSNIV YAYGILAVFC FIAGIVLLVY YKQFSKLTES IPSHDEEH
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