Gene CHU_3723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3723 
Symbol 
ID4184501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4297423 
End bp4298709 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content35% 
IMG OID638073710 
Productmajor facilitator superfamily permease 
Protein accessionYP_680299 
Protein GI110640089 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGAATA AAAAAACATT AGCAATTTTA TTAACGGCAA ATGGTGTATC AAGCTTTGCA 
CAAGGCTTTA CCATGATGTC AATACCTTAT TATTTCAATA AGATAGATAA TTATTCTTTT
TTTAGCTTAA GCTTAACAAT AATCACCTTA GCTTCTTTAT TCTGGGCACT TTACGCAGGT
TCTATTATTG ATGGTTTCAA CCGTAAAGAT GTATTTCTGG GCACCAATTT CGTTGGCGGT
ATTGTTATTC TTTCTATTGC TTCATTAGGC TTCAAAGAAG GAAGTTTAAC CAATATATTG
ATAATAATGG TATATGCACT TACCATGTTT GGATATGTTA TTCACTACCC GAACCTCTAT
GCCTTTTCCC AGGAATTATC AAAGCCAAAA GATTACACGA AAATAACATC TTTAATTGAA
ATTGTTGGCC AATCAACCGT AATGGGTTCT GCAATTATGG GTACCATGTT ACTGAAAGGG
ATGGATGATT TTCAGATTCC GTTTACTCAG ATACATTTAA CATTGGAAAG ATGGGAAATA
CATGAAATCT TTTTATTCGA TGCAATCGCC TATTTTGTTT CTTTTCTTAT CATTTTATTG
ATCAAGTATT CGCCAAATAT GAAACTTGTT ATTTCAGATG AAGGTACATT GTACGAACGT
CTCAAAACCG GTTATATGTA TTTGCGCAAC AATCAGCTCG TTGCTTTATT CGGAATCTGT
TCGTTTGTAA TATTTATCGT TGTCTACATC GAGCAGTTTG CTTTAATGAC ACCATACGTT
TTGAATCACT TAAAAGAAGA TGCTCCGGTA TTGGGATTAA CAGAATTGAT GTATGGCCTT
GGTGCATTAT TCTCCGGAGT AATCATTCAG ACTTTATTCA GTAAAATGCC CGTGCTTAAA
GCGGTAGTGT TATTAACGTT TGCAACCGGC GCTATATTTT TACTAAGCTC TCTTACATGC
GCCGTGATCA TATTTATCAA TGTGGCGTTC CTGAAAGGAT TTACAAACGC CGGTTCACGT
ATTTTCAGAG TTACGTATTT GTTTTCGCTC ATTCCAAACG AATTGGCAGG TAGAGTAAAC
AGTTTCTTTA ACGTAATGAA TACAGTATTC AGATTGATTT TCTTGTCCAT CTTTACATTG
CCATTTTTCA TGGACGGCTC CAATATCGTT TATGCATATG GAATACTGGC TGTATTCTGT
TTTATTGCAG GAATTGTATT ACTGGTCTAT TACAAGCAAT TCTCAAAACT TACTGAATCC
ATACCTTCAC ACGATGAAGA GCATTGA
 
Protein sequence
MTNKKTLAIL LTANGVSSFA QGFTMMSIPY YFNKIDNYSF FSLSLTIITL ASLFWALYAG 
SIIDGFNRKD VFLGTNFVGG IVILSIASLG FKEGSLTNIL IIMVYALTMF GYVIHYPNLY
AFSQELSKPK DYTKITSLIE IVGQSTVMGS AIMGTMLLKG MDDFQIPFTQ IHLTLERWEI
HEIFLFDAIA YFVSFLIILL IKYSPNMKLV ISDEGTLYER LKTGYMYLRN NQLVALFGIC
SFVIFIVVYI EQFALMTPYV LNHLKEDAPV LGLTELMYGL GALFSGVIIQ TLFSKMPVLK
AVVLLTFATG AIFLLSSLTC AVIIFINVAF LKGFTNAGSR IFRVTYLFSL IPNELAGRVN
SFFNVMNTVF RLIFLSIFTL PFFMDGSNIV YAYGILAVFC FIAGIVLLVY YKQFSKLTES
IPSHDEEH