Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3715 |
Symbol | |
ID | 4184493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 4288197 |
End bp | 4291532 |
Gene Length | 3336 bp |
Protein Length | 1111 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638073702 |
Product | PKD repeat-containing protein |
Protein accession | YP_680291 |
Protein GI | 110640081 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.276644 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGTA ACCGTACTTA CCTATTCCAG CTTGTATTTT TTTTATTTGT TTCCCTGCCA GCGTACAGCC AGTTTGTGCC CGAAAAAATA AAAGGCGGCT TATTTATTGA AAATAAAGGG CAGTGGGAAG AGAATGTACT CTATCGGTCT GAAATTCCTT CCGGGCAGTT ATACATTGAA AAAAACCGTT TTCTGTTTAA TTTTTACGAT CGAGAATCTC TGGCAAGTCA TCATAGCCAT GGCCACAGCA ATCCTTCTGC AAATACATCC AGTCAACGAA GCGGAGGCGG CGATATTTTA AAACCCGGAC CAGTTAAGGC ACATGCCTAC GAAGTAGCTT TTTTAGGTTG CAATCCGATT TCTTCTACTG ATGGAATCGA TCCGACAACA TATAATTACA ACTATTTTAA AGGTAACGAC AAGAGTAAAT GGGGTGGCAA TGCCCATGCT TATGGAAAAA CGATTCTTAA TGATATTTAC CCTAAAACTT CATTGGTTTG TTTTGGGCAG GAAACAGGTT TTAAATATGA ATTTCATTTG AAGCCCGGCG CAAATCCTGC ACTTATTCAA TTAAAATATA ACGGCGTCGA TAGTGTTTAT TTAAAAAATG GTGAGCTTAT CATTGAAACG TCAGTAACTG ATTTTTATGA GCAGAAGCCG TTTGCTTATC AGGAAATTGA TGGCAGTAAT GTTGCTGTGC CATGCGAGTT TCGCTTGAAT GATAATGTGC TGAGTTTTGT TTTTCCGAAG GGATATAATA AACGGTATCC GCTTGTAATT GATCCGCAGT TAATCTTTTC TACGTATTCA GGTTCTTATG TAGATAATTG GGGTAATTCA GCAACATATG ATGATGATGG CAATACGTAC ATGGTCGGAA TTGCTTTTGG ATTCGGATAT CCGGTTACTA CAGGAGCGTA TCAGGTTAAT TTTGTAGGAA ATGATTTATA TGATGTTGAC ATAGCAATTA TGAAATTCGG CCCTTTGGGA GAATTACGTT ATGCTACATA TTTAGGAGGT ATTGAAACAG AAATGCCGAG CAGCTGTATT GTAAACAGCA AAAAAGAACT TGTGCTTTTT GGATTTACAA GCTCAGGTGG TAGCTATGGC AAAGCATTTC CTACTACTAC AGGAGCCTAT GATGAAACAT TTCATTATGG TGATTATTCC ATGCCATTTG GCCCCTATGA GCCGATTTTC TTTGATGAAG GAAGCGACCT GTTTATTTCT ATACTCAGCG AAGACGGTAG CAATTTAAAA CATTCAACAC TAATTGGAGG CAGTTCTAAC GATGGTTTTT CCAGTGAGTA CGAACCCATT ACAAGAAACT ATGGAGACCA GCTCAGAGGA GAAATTTTTT GTGATGAGCT TGACAATGTT TATATCGTAA CAAAAACATA TTCACCGGAT ATAATTAACA CTTCAGTTCC TGGTTATGAT AAAACGTTTA ATGGCATCAT GGATGCTTAT GTTTGTAAGC TTACAGGAGA TTTAAGCACC ATGCTGTGGA ATACGTTCAT TGGGGGGGCA GGCTATGATG TTGGTTATTC TATACGCGTA ACTACAGACA AAACAGTTTA CATAACAGGC GGCACAACCA GTACAGATTT GCCCGGTACA GCTTCAGGTA TTAAAACAAC CTTAGCTGCT GGAGATATTG ATGGCTTTGT TGCACACATA AGTGCGGATG GCACCTCGTT ATTACATGCT ACTTATGTGG GAACGGAATC GTATGATCAA TGCTTTTTTA TCCAACTCGA TGCCCTTGAA AATATTTATA TATTAGGACA ATCATTAGGT GACTACCCTA TGTCACAAGG GGTATATGGA AAAGCTAAGA CAGGACAATT TATTCAAAAA CTTAATCCGA CTCTTTCTCA ATCATTGTTA TCTACAACGT TTGGTTATAC AGAACATCAG GTAAGTATTG TTCCGACTGC ATTTTTGGTT AACAGCTGCG ATAATATTTT AATTTCAGGA TGGGGAGGTA ATACAAATAT TAACCCATGG TATCCGCGTC CTCAGCGTCC AAATACAAAT CCAAATCAAT ATTTAGGAGG TACTACAAAT AATTTACAGA CCTCTCCCGA CGCTCTTTAT AAAACTACCG ATGGTTCTGA TTTTTATCTA CTCGTGTTAG AAAAAGAATG CAAAAGTCTG CTTTATGCAA CATTTTATGG CGGAGTCGAT GAAGATGATC ACGTTGATGG CGGTACAAGC CGTTTTGATA AAAACGGTAT TGTGTATCAA TCCGTTTGCG GTAGCTGCGG AGGTACGTCC AGATTTCCTA CAAGTGACAA TGCTGTTTCA AAAATTAACA GATCTGACAA CTGCAACAAC GCCTGCTTTA AATACGATCT TTCCAGCCTG CGTGCTGACT TCATCATGGA TCCGCTTATC GGCTGCGGAC CAACTACTGT TACATTAACC AATACCAGTA CGGGTGGTGT AGCATTTGAA TGGGACCTTG GTGATGGCAC AAAAATAAAC GGACCAGGAC CTGTCACGCA TACATATCCA ACGCCCGGTA CATATCACAT TAAACTGATT GCTACAGATC TTACAACCTG TATCGGAAAA GACACCGCCA CAAAAACGCT GAATGTATTT GCCATTCCAG GCATTGGCAT CACCTTGTCG GATACTACTA TATGTCCCGG AGATACAATC AGCATTCTGA AAAACTGTAA TCCATATTAT ACTTACAATT GGGCTCCGTC AATTGAGATG ATTAACCCTG CAGTATGCGA TGCGCAGTTT TTCCCAAGTA TTACCCGTGA TTATTACCTG ACGGTTATTG ATACAAGTAC CTGCGTATAT ACAGATACAC TTACTATCCA TGTGCCTACA TTAATACCCG GAATCAATTG GGAGAACATG ACCCATTGTT ATGGCAAACC TACCATTGGC TTTAGTAACC CAAGCAAAGG CAGGCTAAAA TACCTTTGGG ACCTTGGCGA CGGAACAACT ACAACCGTAC AATCTCCTGT TCATGAATAT GCCAAAGGCG GCAAATATAT AATAAAAGTA AAGGTCTATG CCAATGATAC CTGTTTTATA GAATCTACTA TACCTCTTGT ACTCGATGAT ATTCAGATTC CGAATTTGTT TACCCCCAAT GATGATGGTA AAAATGATTG CTTCGAAATA AAAGGCTTGT ATCCAAACTG GAAGGTTGAA GTGTATAACC CATGGAGCAA AGCTATATTT AAAACAGATT CGTATAACAA TGAATTCTGC GGAGAGGGTC TGAGTTCGAG TGTATATTAT TACCTGGTTT GCCCGCCATA TGGTAAATGC TGTAAAAGCT GGGTTCAGAT CATTATTGAT AAATAA
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Protein sequence | MNSNRTYLFQ LVFFLFVSLP AYSQFVPEKI KGGLFIENKG QWEENVLYRS EIPSGQLYIE KNRFLFNFYD RESLASHHSH GHSNPSANTS SQRSGGGDIL KPGPVKAHAY EVAFLGCNPI SSTDGIDPTT YNYNYFKGND KSKWGGNAHA YGKTILNDIY PKTSLVCFGQ ETGFKYEFHL KPGANPALIQ LKYNGVDSVY LKNGELIIET SVTDFYEQKP FAYQEIDGSN VAVPCEFRLN DNVLSFVFPK GYNKRYPLVI DPQLIFSTYS GSYVDNWGNS ATYDDDGNTY MVGIAFGFGY PVTTGAYQVN FVGNDLYDVD IAIMKFGPLG ELRYATYLGG IETEMPSSCI VNSKKELVLF GFTSSGGSYG KAFPTTTGAY DETFHYGDYS MPFGPYEPIF FDEGSDLFIS ILSEDGSNLK HSTLIGGSSN DGFSSEYEPI TRNYGDQLRG EIFCDELDNV YIVTKTYSPD IINTSVPGYD KTFNGIMDAY VCKLTGDLST MLWNTFIGGA GYDVGYSIRV TTDKTVYITG GTTSTDLPGT ASGIKTTLAA GDIDGFVAHI SADGTSLLHA TYVGTESYDQ CFFIQLDALE NIYILGQSLG DYPMSQGVYG KAKTGQFIQK LNPTLSQSLL STTFGYTEHQ VSIVPTAFLV NSCDNILISG WGGNTNINPW YPRPQRPNTN PNQYLGGTTN NLQTSPDALY KTTDGSDFYL LVLEKECKSL LYATFYGGVD EDDHVDGGTS RFDKNGIVYQ SVCGSCGGTS RFPTSDNAVS KINRSDNCNN ACFKYDLSSL RADFIMDPLI GCGPTTVTLT NTSTGGVAFE WDLGDGTKIN GPGPVTHTYP TPGTYHIKLI ATDLTTCIGK DTATKTLNVF AIPGIGITLS DTTICPGDTI SILKNCNPYY TYNWAPSIEM INPAVCDAQF FPSITRDYYL TVIDTSTCVY TDTLTIHVPT LIPGINWENM THCYGKPTIG FSNPSKGRLK YLWDLGDGTT TTVQSPVHEY AKGGKYIIKV KVYANDTCFI ESTIPLVLDD IQIPNLFTPN DDGKNDCFEI KGLYPNWKVE VYNPWSKAIF KTDSYNNEFC GEGLSSSVYY YLVCPPYGKC CKSWVQIIID K
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