| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3677 |
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| Symbol | lspA |
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| ID | 4184650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 4249542 |
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| End bp | 4250159 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638073664 |
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| Product | signal peptidase II |
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| Protein accession | YP_680253 |
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| Protein GI | 110640043 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.273504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTATA CCAAATATTT TCTTTTAACA ATCGGCATCA TACTTATTGA CCAGGTGATT
AAGCTGTGGG TGTTCGAAAC GTTCCCTTTT GAAGGATATG AACATCCTTC TTTAAGACTT
GGCGACTGGT TTAAATTACA TTATATCACC AATGAAGGAA TGGCCTTTGG TATAAAGCTG
GCTGGCGTGT ATGGTAAACT AATTCTTAGT TTATTCCGCC TGGTTGCTAT GGTCGGTATT
AGTTACTACC TGTATCTTAT GGCAAAAAAA GGCATGCACG AAGGTTTTCT GTGGTGCATT
GCTTTGATCT TAGGCGGTGC TATGGGTAAT GTAGTAGACA GCACATTCTA CGGTGTATTT
TTAGACTTGC CTACCAGTGA TGCGCCGATG CTTTGGTTTC ACGGTCGTGT GATAGACATG
TTTTATGTAG ACATCTGTAA TTGTCTGATT CCGGAATGGG TTCCTGTATT AGGCGGAAGC
TATTATCCGT TATGGCCGAT TTTTAACTTT GCGGATGCTT CCATATTTGT AGGTGTAGCC
TTAATTTTAA TTTATCAAAA GAAATTCTTT CCGGAGAAAG ACGGCGTAAA AGAAAAAGAA
CAGCACGTGC AGGTATAA
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| Protein sequence | MRYTKYFLLT IGIILIDQVI KLWVFETFPF EGYEHPSLRL GDWFKLHYIT NEGMAFGIKL
AGVYGKLILS LFRLVAMVGI SYYLYLMAKK GMHEGFLWCI ALILGGAMGN VVDSTFYGVF
LDLPTSDAPM LWFHGRVIDM FYVDICNCLI PEWVPVLGGS YYPLWPIFNF ADASIFVGVA
LILIYQKKFF PEKDGVKEKE QHVQV
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