Gene CHU_3655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3655 
Symbol 
ID4184316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4219940 
End bp4220896 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content46% 
IMG OID638073642 
Producthypothetical protein 
Protein accessionYP_680231 
Protein GI110640021 
COG category 
COG ID 
TIGRFAM ID[TIGR03519] Bacteroidetes-specific putative membrane protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT CTTATTTGTT ATTGTGTTTC ATGTTTTGTT GTGCAGTTGG CGCGTTTGCT 
CAGCAGCGTC CGCAATACAC GCAGTATATG GTTAACCCGT TTTTGTTAAA CCCGGCCGTT
TCGGGAACAG AAGACTATGC AGATCTGCGG GCAGGTTACC GCAAGCAGTG GGCAGGTTTT
GAAGGATCAC CGCGTACCAT GTATGTGAGT GCGCATACCA ATATCGGCAA GCATTTAGTT
ACCAATAACC GTTCAAGAAG CAAGAAAAAC GGTTTCCATG GAATCGGCGG TATTATAACC
AACGATGCGA TCGGAGCCAC CAATACGACC ACGTTGAGTG CAGCATATTC CTACCATTTG
AAAGTATCCA AAAAGGTATT TGTATCGCTG GGTGCTATGG GTGGATTTAA CCAGTTTTCG
CTGGATGCCA ACAAGCTTCA GCCGGCCTCT CAAGGAGATA ACCTGATCCA GAGCCAGTCG
AAGATGGGTT TAGGGGATAT CACAGTTGGT GGCTGGGTGT ATTCAGATAA GTTTTACTTT
GGAGCCTCTA TGGCTCAGCT GGCACCGAGC TTAACGTTTA CACGTACAGG GGAAGCGCTT
AACTATCAGC TGGCGCACCA TTATTTTGTG ATGGCCGGCT ATATGATCCC GCTGGGTTAT
GATTTTAAAT TCATTCCATC GGTTTGTATC AAAGGGTTAA CGCCTGCGCC TTTATCGTTT
GATATCAATG CGAAGATCCG TTACAAGGAT TTTTTATGGG CCGGAGTATC GTACAGAAAC
CGGGATGCGG TAGCGGGTAT GGTTGGGATC ATCATCAACA ATACCTTTGA TATCAGCTAT
TCCTATGACT ATGTAACCAG CGACATTCAT AAATATACAG GAGGCTCCCA TGAGATTGTG
GTAGGGTACC GCTTACGCTC TCAGGGCAGA ATCATCTGCC CCTCTAACTT CTGGTAA
 
Protein sequence
MKKSYLLLCF MFCCAVGAFA QQRPQYTQYM VNPFLLNPAV SGTEDYADLR AGYRKQWAGF 
EGSPRTMYVS AHTNIGKHLV TNNRSRSKKN GFHGIGGIIT NDAIGATNTT TLSAAYSYHL
KVSKKVFVSL GAMGGFNQFS LDANKLQPAS QGDNLIQSQS KMGLGDITVG GWVYSDKFYF
GASMAQLAPS LTFTRTGEAL NYQLAHHYFV MAGYMIPLGY DFKFIPSVCI KGLTPAPLSF
DINAKIRYKD FLWAGVSYRN RDAVAGMVGI IINNTFDISY SYDYVTSDIH KYTGGSHEIV
VGYRLRSQGR IICPSNFW