Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3620 |
Symbol | |
ID | 4183604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 4174628 |
End bp | 4175434 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638073607 |
Product | TPR repeat-containing protein |
Protein accession | YP_680196 |
Protein GI | 110639986 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCCA AAATATGTAA CCGAAAAAAT TGCAAACGAT CTGTACAAAA AATGAGAATA CGCTCTTTAT TAATTATCCT TACAATAGGT TTATTACTGG TAAATGCAAT TTGTGTTTCC GCGCTTGGTC AAACGAGTGA AAGCATTGCC CGCGGAGATG TGTATTTTGG TTTAATGCGC TACCGCGATG CGATTGCCTG GTATAAGCTG GATTCCACAA AGGCTGAGGC CCAATGGAAA ATTGCCCGTG CATATGTTTG CTACGGGGAC AACGCAGTGC CGGCAGAGAA AGAATATAAT TTCAGAAATG CTGTACGTGC GGCAAATAAA TGCATCGAAC TGGAAGAAAC CAATGCCAAC GGCCACACCT GGCTTGCTGC GGCACTTGGC AATACAGCTA TGTATGAAGG CAGTAAAACA AAAGTTCGTT TATGTACGCA AATAAAAAAA GAGTTGAACC GTGCAATAGC GTTGAACCCT AAAGATGATA TTGCGTATTC TATTTTAGGT TCTTTTTACC GCGAGATAGG CAACATAAGC TGGCTTGAGA AACAGCTTGC CATGACATTT ATCGGAAAGA TTCCCGATGG AACATATGAA GATTCAGAAA AAGCTTTTGC TAAAGCCATT GCATTAAACC CCACGATCAT GCGTCATTGG TATGAACAGG GTTTGCTTTA CAAATACTGG AATAAAAACG AACAGGCGAT TGCATCCTTT AATAAAGCCA AAGCATGCCC GGTATTTGTC TCCAGCGACA ATAAAAGACT CGCAGCAATA GAGGTGTATT TAAAAAATCT TCAATAA
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Protein sequence | MAAKICNRKN CKRSVQKMRI RSLLIILTIG LLLVNAICVS ALGQTSESIA RGDVYFGLMR YRDAIAWYKL DSTKAEAQWK IARAYVCYGD NAVPAEKEYN FRNAVRAANK CIELEETNAN GHTWLAAALG NTAMYEGSKT KVRLCTQIKK ELNRAIALNP KDDIAYSILG SFYREIGNIS WLEKQLAMTF IGKIPDGTYE DSEKAFAKAI ALNPTIMRHW YEQGLLYKYW NKNEQAIASF NKAKACPVFV SSDNKRLAAI EVYLKNLQ
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