| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3570 |
|---|
| Symbol | ychM |
|---|
| ID | 4186777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 4119616 |
|---|
| End bp | 4121886 |
|---|
| Gene Length | 2271 bp |
|---|
| Protein Length | 756 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638073557 |
|---|
| Product | sulfate transporter |
|---|
| Protein accession | YP_680146 |
|---|
| Protein GI | 110639936 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCAC AGGAAGAGTT AATCTTCGAG TCAGAAGAGC TCGAATCAGA ATCAAAAAAA
GGCTGGACCT TATCCGGCAT TTTAAATCCA TCAGCAACAA GTGCTGTTCT TAAAACCTCG
TTACAAAAAG ATTTATTAGC GGCATTTGTT GTATCTCTGA TCGCGCTGCC GTTATGCATG
GGAATTGCTA TCGCCAGTGG CTTTCCGGCT GTTTCAGGTA TTTATACGGC ACTTATCGGC
GGACTCATCA TTACCTTCAT TTCCGGTACA CACGTAGATA TTAAAGGGCC GGCAAGTGGC
TTGTGTATCA TTATTCTTGG TGCTGTGCAT GCTTTTGGTG AAAACGGGCA AAATCCGTTT
CCTTATGTAC TTGCCTGTTT TTTCGTTGCC GGTATCGTAC AGATGATCTT TGCCTTGCTG
CGTTTTGGTG CGCTGGGTGA TTCTTTTCCA GCATCAGCCG TGCTTGGTAT GATGGCAAGC
TTTGGCATTA TGATCGCCAT TAAACAGTTT TCTGTTCTGA TCGGTGCACA TCCGCATGGT
AAAACAGCAC TGAGCTTACT GACAGAAATT CCTGAATCTG TTGCGCACAT GCATATCCCG
GTTGCTATAA TAGGCATCAT AAGTTTAGCG ATTATGATCG GAATGGGTTT TCTGAAGGGT
GCCTGGACCG CTTACGTGCC GGCTCCGCTG GTTGTTATTA TCGTTGCTGT TCCATTAGGT
TTATTGTTTG ATATCGGCGC ACTGACAAAT ACTGAAACAG GTGTTAATGA ATACCTGGTA
TCGCTGCCAA ACAACTTGTT TGAAGGGATC ATGTTTCCTG ATTTTACTCA ACTTATTTCC
CTCACTTCCC TGCAATATAT TATTATGATT GCTTTGGCGG GCAGCCTTGA GTCACTGCTG
AGTTCAAAAG CCATTGAAAT GGCTGATACG AAAAGCCGCA AGTCGCGCCT CAATAAAGAT
CTGTTTGCAA TTGGAATGGG CAACTCTCTG CTTGCACTTA TAGGAGGTTT ACCCATGATC
TCGGATGCAA AAAGAAGTTT GATAAACGTA AGTTATGGTG CACAATCTGC CTGGTCTAAT
TTCTTTCATG CAGGTTTTTT ATTGCTGATT GTTGTTGTAG GAGGGCCGCT CATCCGTCTG
GTTCCGCAGG CAGCGCTGGC AGGTATCTTA ATGTATATTG CCTATAAACT TGCTTCCCCG
AAACAATTGT CCGCTGCCTA TAAGATCGGC CCGGAGCAAT TGATTGTATT TCTTACAACC
ATGATCATCT GTTTGTTTAC AAATTTATTG TGGGGCATTC TTGCAGGCAT TATCCTGGAA
TTAATTATTC ACATGTATTT TGGCGTGCCG CTTAAAAGTC TGTTTGGCAC AAAGGCTGAT
CTGAAACAGG ATGCCGAACA GAATTACACC CTGCACATTT ATGATGCTGC CGTTTTTTCA
AACTACATGG GAATAAAAAA ATATCTCCTT ACGTTGCCTG AATATTCCAA CGTTACATTC
GATTTTTCAG AAGCAAAAGT TGTAGATCAT ACTTTTCTGG AACACTTGTA TTACTACGAA
GAAAACATTC GTAAAAAAGG CGGACAAATT GTGTTGGCGG GCCTGGACCA TCACAAACAT
TTAAGCGATC ACCCGCTCGC ATCCAGACGC ATTGTCGATT CAGACATGCT TACAGAACGG
CAGGAACAAA TGCAGCTCTT TGCAGCTAAA AACGGATATG CGTTTGATCA CCGCATTGTT
TCTAATTTGT CTAAGCTGGA AGGCTTTTTA GAAACAAAAC ATATTCAGAT AAAACTGCAG
CGAAACGTGC TCAGCGGTAA CTACTATTCC ATTAACTTTG AATTGTCTGA TTTAATGCTG
ACACACAATG CAGGCGGCAG AAGCCATAGC ATTAATATGA CCAATGCATT GTTTTCCATT
CCCGGTATGA ACATCCCTGA ATTCATTTTA GAGCCGGATG GCTTCACCGA TGATTTTAAA
GACAATTCAG ATTTCAAGGA TATTGATTTT ACACAACATG CTGTTTTCTC TTATTACTAC
TTGTTAAAAG GACCAAACCA GAATGCGATC AGTGATTTTT TTACCGCATC ACTCATCCGG
TTCTTTGAGA AGAACAAAGG CTTTCGTTTG GAGTCAAAAC ACAATATGAT TTTCGTATAC
AAAAAAGCAC GACGTATTAA GCCTGAAAAT TTAACTATGC TGATTGATTT TACAAAGGCG
CTCCTATACG AATTGTATGT GCAAAAAAAT CTAAGTATAA GAACTCCTTA A
|
|---|
| Protein sequence | MIAQEELIFE SEELESESKK GWTLSGILNP SATSAVLKTS LQKDLLAAFV VSLIALPLCM
GIAIASGFPA VSGIYTALIG GLIITFISGT HVDIKGPASG LCIIILGAVH AFGENGQNPF
PYVLACFFVA GIVQMIFALL RFGALGDSFP ASAVLGMMAS FGIMIAIKQF SVLIGAHPHG
KTALSLLTEI PESVAHMHIP VAIIGIISLA IMIGMGFLKG AWTAYVPAPL VVIIVAVPLG
LLFDIGALTN TETGVNEYLV SLPNNLFEGI MFPDFTQLIS LTSLQYIIMI ALAGSLESLL
SSKAIEMADT KSRKSRLNKD LFAIGMGNSL LALIGGLPMI SDAKRSLINV SYGAQSAWSN
FFHAGFLLLI VVVGGPLIRL VPQAALAGIL MYIAYKLASP KQLSAAYKIG PEQLIVFLTT
MIICLFTNLL WGILAGIILE LIIHMYFGVP LKSLFGTKAD LKQDAEQNYT LHIYDAAVFS
NYMGIKKYLL TLPEYSNVTF DFSEAKVVDH TFLEHLYYYE ENIRKKGGQI VLAGLDHHKH
LSDHPLASRR IVDSDMLTER QEQMQLFAAK NGYAFDHRIV SNLSKLEGFL ETKHIQIKLQ
RNVLSGNYYS INFELSDLML THNAGGRSHS INMTNALFSI PGMNIPEFIL EPDGFTDDFK
DNSDFKDIDF TQHAVFSYYY LLKGPNQNAI SDFFTASLIR FFEKNKGFRL ESKHNMIFVY
KKARRIKPEN LTMLIDFTKA LLYELYVQKN LSIRTP
|
|---|
| |