Gene CHU_3568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3568 
Symbol 
ID4186775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4117891 
End bp4118598 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content41% 
IMG OID638073555 
Producthypothetical protein 
Protein accessionYP_680144 
Protein GI110639934 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.781941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA AACATATTTT ATTCGGAATT TTTATTTCAT CTGCAGTTAC ATCCTGCAAT 
TCCATTAAGG GGTCAGGCAA TGTTGTTACT TCCATTCGGC CTGTACAGGA ATTTTCAGGA
ATAATTTCAA GCGGCAGCTT TAATATGTAT CTCACACAAT CAGCGGTGCA GGAAGTAAAA
ATCATTGCCG ATGATAATGT TTTACAATAC ATAGAAACGA ACGTTCGTGA TGGTATACTT
ACCGTTACAT TCAAAGATAA AGTGCATATT AAAAACTCCA CACGTTTGGA TATTTATGTC
AGCGGGCCTG TAATTGAAAA AATAAATCTT GAAGGTTCGG GGAACATTCA AACAACAAAC
AGGTTGCATT CAAATAACCT CGTACTTGTA TTGAATGGCT CCGGAAAAAT GGTTGCAGAA
GATGCATGTG AAACAGCTAT TGTTCAATTA AACGGTTCAG GTAATATTAC CTTGACAGGA
AAAGCAAAGA ATCAAACCGC ATCTGTAAGC GGCTCCGGTA ATGTCAATGC TTCCGGCTTT
ACAACCGAAA ACACAACCGC CAGCCTTTCC GGCTCCGGCA GCATAGGCTT GTATGCAACA
GAAAGTCTGC ATGCATCATT AAGCGGTTCC GGATCGATAC GTTATTCCGG GAATCCGGCT
TCTGTAAAAA AGGAGGTGAG TGGTTCCGGC ATGGTTGAAA GCAGGTGA
 
Protein sequence
MKTKHILFGI FISSAVTSCN SIKGSGNVVT SIRPVQEFSG IISSGSFNMY LTQSAVQEVK 
IIADDNVLQY IETNVRDGIL TVTFKDKVHI KNSTRLDIYV SGPVIEKINL EGSGNIQTTN
RLHSNNLVLV LNGSGKMVAE DACETAIVQL NGSGNITLTG KAKNQTASVS GSGNVNASGF
TTENTTASLS GSGSIGLYAT ESLHASLSGS GSIRYSGNPA SVKKEVSGSG MVESR