Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3567 |
Symbol | |
ID | 4184404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4116050 |
End bp | 4117777 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638073554 |
Product | hypothetical protein |
Protein accession | YP_680143 |
Protein GI | 110639933 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.336155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCTCA TTAAAAAACT TCACCTGGTA ATACTATGTC TGGCTTTTTC CATTCACATT TCAAATGCAC AAATATTGGA AAAACATGTA ACCATGCAAT TCAAAAACAT AACACTTGAT GAAGCGATTA AAAAAATGAA AACTACCTAC GGCGTAAACT TTACATATTC GCCCGACCAG ATCAACTTGA ATCAGAAGGT ATCGTTGAAT GTTAAAAGTG TTTCACTGGG ACACGCATTA AATGAATTGT TTATTCCTAC AACGATCACC TACAAATCTG TCGGGAATCA GATTGTATTG AAGAAAGGCA AACTGCCAAG CCGTGTATCG ACATCCGGCA TACAATCTAT TTCTGCTAAA CCAGTAATAA AAAGTGATAC AACTACAAAA AAGGTGGCCA TCAAAGACAC TATGAAAAAT GAGCTTACCC TGCAGGCAAA ACCATTGGAA ATAAAATCAA CAGATAGTTT GCAGGCAACA AAAGAGCTTG ACCAATCATA CACAAAAGAA ATGTCAGATC TGAACGAATC CTATCTGCAT AAAAAAGACA GTATCTCAAC GGTTGCCTTT TCTAATAAAA TGAAATTAAA ACAAAGCTTA AAGCAGGCTA AAAACACGTT GGTGCGTGAA TACAATCAAT TAAAAGATAG TATCATGTAT TCCAAAAAAT TTAAAAATAA AACGATCGAC ACAACGGCAG CTTTATCTGA CGATGATTTA TTAATACACG ATAATTTTCA GTTTACAGGA ATTTATCCGT TGGGAACACA CTTGACAACA AGCGGCCTGT ATAGAAATGA TTTTTCGTTG AATTTATTAG TAGGGTATAA TGGAGCAGTA TCTGCGTTTG AATTTGGTGG TATTGGAAAT ATTGTCCGGA AAGAAATGCA GGGTTTTCAA TTTGCCGGTG TTGTAAATAC GGTAGGTGGT TACGTACGTG GGACGCAGGT TGCAGGTATT GTAAATATTT GTAATCAGGA AGTGATCGGC GGACAGGTTT CAGGTATTTT AAATATTGCG AACGGTGCTA CATCCGGTGG GCAGATTGCA GGTGTGGTGA ATGTTGGCAC GGAACAAATG GATGGTGTGC AGATATCTGG TGTTGTAAAT GAACATAACG GAATAATTAA TGGCGGACAG ATCGGTTTGA TTAATCATGC GCACAAAGTA AAAGGTTTTC AACTGGGTTT TATAAATATC AGTGATACCA TTCAGGGAAT TCCAATTGGT TTGCTATCTA TTTCAAAAAA TGGATACGGA AGAATTGAAA CGTATTATTC AGAAACAACT CAGGGAAATT TACTTATCAA AACAGGAGTT AAAAGTTTTT ATAATATATT TCAATTCGGC GGCAATTTTA ATTCAGACAG CTACCGCTGG ACATTCGGGT ATGGCTTAGG TTCAACCATA CATATGAGCA AACGAAGTAC ACTTTCCTTT GATGTGCTTG CAATGCACGT TAATGAGAAC GAAGCATTTA CAAGTAAACT TAACGAACAG GGTCAACTAC GCATCATGCT TGGGGTAAAT CTTTCAAAAA GAGTTTCCCT GTTTGCAGGT CCAACATTTA ATACCATGTT CTCTCAATAT AAAAATGAAG ACGCTACAAT CGGCTCACAG ATGATCCCTC AAAAATCAGT CGTGTATGAA CAAACGATTA AAGACAGCGA CGGAAAAAAT ATTTACAATC CATACTGGAT AGGCTTTAAC GCCGGGCTGC GTTTTTAA
|
Protein sequence | MKLIKKLHLV ILCLAFSIHI SNAQILEKHV TMQFKNITLD EAIKKMKTTY GVNFTYSPDQ INLNQKVSLN VKSVSLGHAL NELFIPTTIT YKSVGNQIVL KKGKLPSRVS TSGIQSISAK PVIKSDTTTK KVAIKDTMKN ELTLQAKPLE IKSTDSLQAT KELDQSYTKE MSDLNESYLH KKDSISTVAF SNKMKLKQSL KQAKNTLVRE YNQLKDSIMY SKKFKNKTID TTAALSDDDL LIHDNFQFTG IYPLGTHLTT SGLYRNDFSL NLLVGYNGAV SAFEFGGIGN IVRKEMQGFQ FAGVVNTVGG YVRGTQVAGI VNICNQEVIG GQVSGILNIA NGATSGGQIA GVVNVGTEQM DGVQISGVVN EHNGIINGGQ IGLINHAHKV KGFQLGFINI SDTIQGIPIG LLSISKNGYG RIETYYSETT QGNLLIKTGV KSFYNIFQFG GNFNSDSYRW TFGYGLGSTI HMSKRSTLSF DVLAMHVNEN EAFTSKLNEQ GQLRIMLGVN LSKRVSLFAG PTFNTMFSQY KNEDATIGSQ MIPQKSVVYE QTIKDSDGKN IYNPYWIGFN AGLRF
|
| |