Gene CHU_3567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3567 
Symbol 
ID4184404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4116050 
End bp4117777 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content37% 
IMG OID638073554 
Producthypothetical protein 
Protein accessionYP_680143 
Protein GI110639933 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.336155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCA TTAAAAAACT TCACCTGGTA ATACTATGTC TGGCTTTTTC CATTCACATT 
TCAAATGCAC AAATATTGGA AAAACATGTA ACCATGCAAT TCAAAAACAT AACACTTGAT
GAAGCGATTA AAAAAATGAA AACTACCTAC GGCGTAAACT TTACATATTC GCCCGACCAG
ATCAACTTGA ATCAGAAGGT ATCGTTGAAT GTTAAAAGTG TTTCACTGGG ACACGCATTA
AATGAATTGT TTATTCCTAC AACGATCACC TACAAATCTG TCGGGAATCA GATTGTATTG
AAGAAAGGCA AACTGCCAAG CCGTGTATCG ACATCCGGCA TACAATCTAT TTCTGCTAAA
CCAGTAATAA AAAGTGATAC AACTACAAAA AAGGTGGCCA TCAAAGACAC TATGAAAAAT
GAGCTTACCC TGCAGGCAAA ACCATTGGAA ATAAAATCAA CAGATAGTTT GCAGGCAACA
AAAGAGCTTG ACCAATCATA CACAAAAGAA ATGTCAGATC TGAACGAATC CTATCTGCAT
AAAAAAGACA GTATCTCAAC GGTTGCCTTT TCTAATAAAA TGAAATTAAA ACAAAGCTTA
AAGCAGGCTA AAAACACGTT GGTGCGTGAA TACAATCAAT TAAAAGATAG TATCATGTAT
TCCAAAAAAT TTAAAAATAA AACGATCGAC ACAACGGCAG CTTTATCTGA CGATGATTTA
TTAATACACG ATAATTTTCA GTTTACAGGA ATTTATCCGT TGGGAACACA CTTGACAACA
AGCGGCCTGT ATAGAAATGA TTTTTCGTTG AATTTATTAG TAGGGTATAA TGGAGCAGTA
TCTGCGTTTG AATTTGGTGG TATTGGAAAT ATTGTCCGGA AAGAAATGCA GGGTTTTCAA
TTTGCCGGTG TTGTAAATAC GGTAGGTGGT TACGTACGTG GGACGCAGGT TGCAGGTATT
GTAAATATTT GTAATCAGGA AGTGATCGGC GGACAGGTTT CAGGTATTTT AAATATTGCG
AACGGTGCTA CATCCGGTGG GCAGATTGCA GGTGTGGTGA ATGTTGGCAC GGAACAAATG
GATGGTGTGC AGATATCTGG TGTTGTAAAT GAACATAACG GAATAATTAA TGGCGGACAG
ATCGGTTTGA TTAATCATGC GCACAAAGTA AAAGGTTTTC AACTGGGTTT TATAAATATC
AGTGATACCA TTCAGGGAAT TCCAATTGGT TTGCTATCTA TTTCAAAAAA TGGATACGGA
AGAATTGAAA CGTATTATTC AGAAACAACT CAGGGAAATT TACTTATCAA AACAGGAGTT
AAAAGTTTTT ATAATATATT TCAATTCGGC GGCAATTTTA ATTCAGACAG CTACCGCTGG
ACATTCGGGT ATGGCTTAGG TTCAACCATA CATATGAGCA AACGAAGTAC ACTTTCCTTT
GATGTGCTTG CAATGCACGT TAATGAGAAC GAAGCATTTA CAAGTAAACT TAACGAACAG
GGTCAACTAC GCATCATGCT TGGGGTAAAT CTTTCAAAAA GAGTTTCCCT GTTTGCAGGT
CCAACATTTA ATACCATGTT CTCTCAATAT AAAAATGAAG ACGCTACAAT CGGCTCACAG
ATGATCCCTC AAAAATCAGT CGTGTATGAA CAAACGATTA AAGACAGCGA CGGAAAAAAT
ATTTACAATC CATACTGGAT AGGCTTTAAC GCCGGGCTGC GTTTTTAA
 
Protein sequence
MKLIKKLHLV ILCLAFSIHI SNAQILEKHV TMQFKNITLD EAIKKMKTTY GVNFTYSPDQ 
INLNQKVSLN VKSVSLGHAL NELFIPTTIT YKSVGNQIVL KKGKLPSRVS TSGIQSISAK
PVIKSDTTTK KVAIKDTMKN ELTLQAKPLE IKSTDSLQAT KELDQSYTKE MSDLNESYLH
KKDSISTVAF SNKMKLKQSL KQAKNTLVRE YNQLKDSIMY SKKFKNKTID TTAALSDDDL
LIHDNFQFTG IYPLGTHLTT SGLYRNDFSL NLLVGYNGAV SAFEFGGIGN IVRKEMQGFQ
FAGVVNTVGG YVRGTQVAGI VNICNQEVIG GQVSGILNIA NGATSGGQIA GVVNVGTEQM
DGVQISGVVN EHNGIINGGQ IGLINHAHKV KGFQLGFINI SDTIQGIPIG LLSISKNGYG
RIETYYSETT QGNLLIKTGV KSFYNIFQFG GNFNSDSYRW TFGYGLGSTI HMSKRSTLSF
DVLAMHVNEN EAFTSKLNEQ GQLRIMLGVN LSKRVSLFAG PTFNTMFSQY KNEDATIGSQ
MIPQKSVVYE QTIKDSDGKN IYNPYWIGFN AGLRF