Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3528 |
Symbol | lemA |
ID | 4183551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4083849 |
End bp | 4084412 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638073515 |
Product | LemA-like protein |
Protein accession | YP_680104 |
Protein GI | 110639894 |
COG category | [S] Function unknown |
COG ID | [COG1704] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.555314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAGGTT TAATTTTATT GCTCGTACCC ATCGCCTTAA TTATTTTCTG GTTCATCGGA ATTTATAATT CATTGATCGG ACTTCGTAAC CGCAGGGAGC AGGCATTTTC TGATATTGAT GTACAGCTGA GACAACGCAG CGATCTTATT CCTCAACTGG TTGAAACCGT AAAAGGCTAT GCCGGCCATG AAAGTAAAAC ACTTACAGAT GTTATTGCTG CACGTAACAG TGTATTGAGC GCCCAATCGA TTGATGAAAA AATAAAATCA GACAGCCAGC TTACCTCGGC ATTGCAAGGC CTGCGTCTGA CTGTAGAAGC CTATCCTGAT TTGAAAGCAA ATCAGAATTT TTTACATCTG CAGCAGGAGA TAAGCGATAT CGAAAATAAA CTTGCAGCAG CGCGCCGTTT CTTTAATGCA GCAACCAAAG AATATAATAC TTCGGTTGAA TCATTTCCGA ATAATATTAT TGCGGGCAGG TATAATTTTA AAAAAGAATC TATGTACGAC CTGGGTACAG AGAAAAGAAA AACGATGGAA GAACCGCCGG TAATTAAGTT TTAA
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Protein sequence | MLGLILLLVP IALIIFWFIG IYNSLIGLRN RREQAFSDID VQLRQRSDLI PQLVETVKGY AGHESKTLTD VIAARNSVLS AQSIDEKIKS DSQLTSALQG LRLTVEAYPD LKANQNFLHL QQEISDIENK LAAARRFFNA ATKEYNTSVE SFPNNIIAGR YNFKKESMYD LGTEKRKTME EPPVIKF
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