Gene CHU_3528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3528 
SymbollemA 
ID4183551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4083849 
End bp4084412 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content40% 
IMG OID638073515 
ProductLemA-like protein 
Protein accessionYP_680104 
Protein GI110639894 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.555314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGGTT TAATTTTATT GCTCGTACCC ATCGCCTTAA TTATTTTCTG GTTCATCGGA 
ATTTATAATT CATTGATCGG ACTTCGTAAC CGCAGGGAGC AGGCATTTTC TGATATTGAT
GTACAGCTGA GACAACGCAG CGATCTTATT CCTCAACTGG TTGAAACCGT AAAAGGCTAT
GCCGGCCATG AAAGTAAAAC ACTTACAGAT GTTATTGCTG CACGTAACAG TGTATTGAGC
GCCCAATCGA TTGATGAAAA AATAAAATCA GACAGCCAGC TTACCTCGGC ATTGCAAGGC
CTGCGTCTGA CTGTAGAAGC CTATCCTGAT TTGAAAGCAA ATCAGAATTT TTTACATCTG
CAGCAGGAGA TAAGCGATAT CGAAAATAAA CTTGCAGCAG CGCGCCGTTT CTTTAATGCA
GCAACCAAAG AATATAATAC TTCGGTTGAA TCATTTCCGA ATAATATTAT TGCGGGCAGG
TATAATTTTA AAAAAGAATC TATGTACGAC CTGGGTACAG AGAAAAGAAA AACGATGGAA
GAACCGCCGG TAATTAAGTT TTAA
 
Protein sequence
MLGLILLLVP IALIIFWFIG IYNSLIGLRN RREQAFSDID VQLRQRSDLI PQLVETVKGY 
AGHESKTLTD VIAARNSVLS AQSIDEKIKS DSQLTSALQG LRLTVEAYPD LKANQNFLHL
QQEISDIENK LAAARRFFNA ATKEYNTSVE SFPNNIIAGR YNFKKESMYD LGTEKRKTME
EPPVIKF