Gene CHU_3501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3501 
Symbol 
ID4183895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4052139 
End bp4052570 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content36% 
IMG OID638073488 
Producthypothetical protein 
Protein accessionYP_680077 
Protein GI110639867 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0394911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGAAG AAACAATCTT CTTCTTTAAA GAAGATACTC AGTACCAATT AAGGCAACGT 
GCAGAAATAC GTACCTGGCT GAATACAATT GCTAAAAAGG AAAAGTATTC CATCTTAGAA
CTCAACTATA TTTTTTGTTC GGATGAATAC CTTCTTCAAA TGAACAGAGA TTTTTTAGAC
CACGATTATT ATACCGATAT TATCACGTTT GATAATAGCG AAGTTAAAGG TAAAATAGAA
GGGGATATTT TTATCAGCAT TGATCGGGTT AAAGACAATG CACAGCTCCA GCATTCAACA
GTTAAAGATG AGTTGCACCG GGTATTGGCA CATGGTCTGC TCCATTTAAC CGGATATAAA
GACAAAACAA CAAAGGAAAA GGAAATGATG CGGGCAAAAG AAGACGCATC CTTATCTTTG
CGTAAATTCT GA
 
Protein sequence
MKEETIFFFK EDTQYQLRQR AEIRTWLNTI AKKEKYSILE LNYIFCSDEY LLQMNRDFLD 
HDYYTDIITF DNSEVKGKIE GDIFISIDRV KDNAQLQHST VKDELHRVLA HGLLHLTGYK
DKTTKEKEMM RAKEDASLSL RKF