Gene CHU_3467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3467 
Symbol 
ID4186045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4011648 
End bp4012289 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content36% 
IMG OID638073455 
Producthypothetical protein 
Protein accessionYP_680044 
Protein GI110639834 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.28908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCAAC GCATTTCCCT AATTATAAAC GGCATACTAG CCGTAGCCGT AATCGGCTTA 
TATGTGCTTC ATTTTAAAGG TTCAAAAACG GAAGCAGAAA CAACAACTTC AAAATCAGAT
ACAACAAACA TAGAAGCAGC AGTTAAGTTA GACAGCCTGC CGGATCTGGG TTCAAGCAAT
GGCGCCATAG CGTTTATAGA TTTTGAAGAA CTGACAGGTA AATATCAATT CTATAAAGAT
GGTGTAGCAA ATCTTGAAAA TGATTTTAAA AAGAAAGAAG CTGAACTGAT GAAAAAGCAG
CAAACGCTGG AAGAAAATTT TGCAAGATAT CAGCAATTAG CAGCCAGCCT TACTCCGGAA
GTTAGAGAAA AAAGAGAAAA AGACCTGATG GAAGAAGAGC AGCGCTTACT GCAATTGAGA
GATCGTTTAG GAAAAGACCT GACAGATAAA GAAGCAAACT TCAATAAAGA GTTTTTAAAG
AAAATAGATA GTTATCTGAA GGCATTGAGC CAGGAAAAAA ATTATTCGTA TGTGTTCACG
TACGTTAAAG GTGGCCCCGC TACAATTGTT TATGCAAAAG ATACCTTGAA TATTTCAACA
CAAGTGATCA ATGCATTGAA CGATCAGTAT AAAAAGAAAT AA
 
Protein sequence
MNQRISLIIN GILAVAVIGL YVLHFKGSKT EAETTTSKSD TTNIEAAVKL DSLPDLGSSN 
GAIAFIDFEE LTGKYQFYKD GVANLENDFK KKEAELMKKQ QTLEENFARY QQLAASLTPE
VREKREKDLM EEEQRLLQLR DRLGKDLTDK EANFNKEFLK KIDSYLKALS QEKNYSYVFT
YVKGGPATIV YAKDTLNIST QVINALNDQY KKK