Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3467 |
Symbol | |
ID | 4186045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 4011648 |
End bp | 4012289 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638073455 |
Product | hypothetical protein |
Protein accession | YP_680044 |
Protein GI | 110639834 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.28908 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAATCAAC GCATTTCCCT AATTATAAAC GGCATACTAG CCGTAGCCGT AATCGGCTTA TATGTGCTTC ATTTTAAAGG TTCAAAAACG GAAGCAGAAA CAACAACTTC AAAATCAGAT ACAACAAACA TAGAAGCAGC AGTTAAGTTA GACAGCCTGC CGGATCTGGG TTCAAGCAAT GGCGCCATAG CGTTTATAGA TTTTGAAGAA CTGACAGGTA AATATCAATT CTATAAAGAT GGTGTAGCAA ATCTTGAAAA TGATTTTAAA AAGAAAGAAG CTGAACTGAT GAAAAAGCAG CAAACGCTGG AAGAAAATTT TGCAAGATAT CAGCAATTAG CAGCCAGCCT TACTCCGGAA GTTAGAGAAA AAAGAGAAAA AGACCTGATG GAAGAAGAGC AGCGCTTACT GCAATTGAGA GATCGTTTAG GAAAAGACCT GACAGATAAA GAAGCAAACT TCAATAAAGA GTTTTTAAAG AAAATAGATA GTTATCTGAA GGCATTGAGC CAGGAAAAAA ATTATTCGTA TGTGTTCACG TACGTTAAAG GTGGCCCCGC TACAATTGTT TATGCAAAAG ATACCTTGAA TATTTCAACA CAAGTGATCA ATGCATTGAA CGATCAGTAT AAAAAGAAAT AA
|
Protein sequence | MNQRISLIIN GILAVAVIGL YVLHFKGSKT EAETTTSKSD TTNIEAAVKL DSLPDLGSSN GAIAFIDFEE LTGKYQFYKD GVANLENDFK KKEAELMKKQ QTLEENFARY QQLAASLTPE VREKREKDLM EEEQRLLQLR DRLGKDLTDK EANFNKEFLK KIDSYLKALS QEKNYSYVFT YVKGGPATIV YAKDTLNIST QVINALNDQY KKK
|
| |