Gene CHU_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3456 
Symbol 
ID4186034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3999703 
End bp4001049 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content43% 
IMG OID638073444 
Producthypothetical protein 
Protein accessionYP_680033 
Protein GI110639823 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0337071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAAAA TACTTAAGTG GGTTTTGGGA ATCGTCAGTA CGCTTTTAGT GTTGGTGTTG 
GTCCTTTTCA CTACTGTTGA CCGCACGCCG TATAAGCAAA TGCCTTACTA TACATCTATG
ATGAAGGCAT TGGATACATT TCATGTGGAT GTGCAGCATA AAAAAGGTGA TACCTTAAGA
GCTGCGTGGT ATAAAGTTGC CTTAACACCA CATACTTTTC CGCATCCGCT TGCCGGCTAT
GGTTTACGCA AAAAAGCGGT GTCGGTAAAT GATACAACTT TTGTGCGGAC ATTTATTTTC
GATAATGCGA AAACCAGGGT AGCGTATGTG TCTTTAGATC TGCTGATCTT TCCGCCTGCA
TTAAAAGACC GGGTGAGAGC CGAGCTTGAA ACAACATATA ACCTGCAGGT TTTTTTAACA
GCTACACATA CACACAGTGC TCCCGGGGGC TGGGAGCCTA AAATTGCCGG TCGTGTACTG
GCAGGAGAAT ATTCGGATGA ATATGTTGCA TTGCTTTTTA ATGCAATTAA TGAATGCATT
TCAAAAGCCA TTCCTCGTTT GCAAAAAGTT GAACAGGCAT ACATTCGTGT AAGTGCGCCG
GAAGCCGTTC AAAACAGGCT TAAAGGTGCA GATGCTCCTA AAGATTCATT TATCCGCGGC
ATTAAATTCA GGAATAAATC AGGAGAAGAG GCTTGTCTTT TTACGTTTGC CGCGCATGCC
AATTGTTTAA ATTCGGATGT AGATTATGTC TCTGCAGATT ATCCCGGCAT TGTATCCGCA
GAACTGGAAA AAAGAAAGTG GGCCTCTTTT GTAAGTTATG CCGCTGGTGC TGTAGGCAGT
CATGCGCCAA CGTTTGAAAC AATCTTAGAC GGCAAACTGC GTGCGGATAC GGTATCATCT
ATTTTAGTTG AAAAGCTTCA GGAAACAAAG GCAGCGTATG CGTATACGAA TCAGCTATAC
TACCACCGCT TGCCACTTTT TTTAAGAGAC GCACATCTGC GTGTTGAAAA AGATATCCGC
ATCCGCCCAT GGGTATTTAA TACAATACTC GGGAAAGACA TTCCGGATAT TCAGATAATA
GAAATCGGTG AAACGGTATT GTTAGGTATG CCTTGCGATT ACTCCGGAGA ACTTATGCCG
CCGCTTGAGA AAATATGTGC AGATAACCAG AGTAATTTTA TGCTGAGCGG ATTTAACGGC
GGCTACATCG GGTATATTAC AGATGACGCG TGTTACGACT GGGATCGCGG GGAAACAATG
GATATGAACT GGTTTGGTCC GTATAACGCA GCCTACCTGA CAGAAGTGAA TACAGTTATT
TTGAAGAAAG TACTCACGGG TGAGTGA
 
Protein sequence
MKKILKWVLG IVSTLLVLVL VLFTTVDRTP YKQMPYYTSM MKALDTFHVD VQHKKGDTLR 
AAWYKVALTP HTFPHPLAGY GLRKKAVSVN DTTFVRTFIF DNAKTRVAYV SLDLLIFPPA
LKDRVRAELE TTYNLQVFLT ATHTHSAPGG WEPKIAGRVL AGEYSDEYVA LLFNAINECI
SKAIPRLQKV EQAYIRVSAP EAVQNRLKGA DAPKDSFIRG IKFRNKSGEE ACLFTFAAHA
NCLNSDVDYV SADYPGIVSA ELEKRKWASF VSYAAGAVGS HAPTFETILD GKLRADTVSS
ILVEKLQETK AAYAYTNQLY YHRLPLFLRD AHLRVEKDIR IRPWVFNTIL GKDIPDIQII
EIGETVLLGM PCDYSGELMP PLEKICADNQ SNFMLSGFNG GYIGYITDDA CYDWDRGETM
DMNWFGPYNA AYLTEVNTVI LKKVLTGE