Gene CHU_3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3409 
Symbol 
ID4186282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3887161 
End bp3888144 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content41% 
IMG OID638073399 
Producthypothetical protein 
Protein accessionYP_679988 
Protein GI110639778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.850986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAT TTAAATTACT ATTCTTCGTT ATTTTTTTAG TGGGTATTAA TGCTCATGCG 
CAGCAAGGCT TTAAAAAATA CAGATATTAC AGTATTGGCG GCTGTCTTAA TGCCATGAAT
TATGTGGGGG AATTAGATCC GGGGCCGAGC TTTATAAGCC CGAGTATTAA ATTCACACGG
TATAATTTTG GCGTTACGGG TTTATACAGA TGGAAGCCAC GTGTTTCTTT AAGAGGAACA
TTCTCCTACG GCAGAATTAA AGGAGATGAT TCAGAAAGTG CAGATTACAC CAACAAAAAC
GTTTATCGTT TATACCGCAA TCTTTCTTTC AGAAATCAGA TATATGAATT CAAGTTTGAC
GTTGTAATTG ATCTGTTTGA AAATTCAAGA AGATATACCA AACGACCTGA CTATACGCCT
TATATGTTTG TTGGTCTTGC GTATTTTCAC CACAACCCTC AAGGCCAGAC GCCCGATGGA
GACTGGGTTA ATCTGAAAGA CTTACATACA GAAGGCCAGG GCTTACCCGG CGGACCAAAA
AATTATTCCA GAAACCAGAT TGCCTTACCT ATTGGCGTTG GCTTTAGATA TAAATTGGCA
AAACAATGGG ATTTGGCCTT TGATGTTGGC TGGAGATTTA CATTAACCGA TTATCTGGAT
GATGTTGCCG GCGTTTATTA CGACAAGCAG GCGCTTACCG ATGCCTACGG CGATCAAAGC
AGAATTATGT CGGACAGATC GTATGAGGCA TATTCATCCA ATGCTGAATT AGCAGCCAGT
GCCGATAACC ACTATTCGCC TACACTTACA GGCTATAACG GACATCCGAT GAATCAAAAT
GACGGATGGA CAGGTATCAG TACGTACGGC CAGCAAGGCG GCCAGCGCGG AGATTTAAAA
GGCAGAAGAG ACGTATATAT AATTACAGGC TTTCACTTAA CATATATCTT TCCAGGGAAA
GTGGTTTGTC CAAAATTTAG ATAA
 
Protein sequence
MKQFKLLFFV IFLVGINAHA QQGFKKYRYY SIGGCLNAMN YVGELDPGPS FISPSIKFTR 
YNFGVTGLYR WKPRVSLRGT FSYGRIKGDD SESADYTNKN VYRLYRNLSF RNQIYEFKFD
VVIDLFENSR RYTKRPDYTP YMFVGLAYFH HNPQGQTPDG DWVNLKDLHT EGQGLPGGPK
NYSRNQIALP IGVGFRYKLA KQWDLAFDVG WRFTLTDYLD DVAGVYYDKQ ALTDAYGDQS
RIMSDRSYEA YSSNAELAAS ADNHYSPTLT GYNGHPMNQN DGWTGISTYG QQGGQRGDLK
GRRDVYIITG FHLTYIFPGK VVCPKFR