Gene CHU_3397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3397 
SymbolrpsU 
ID4186512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3878485 
End bp3878682 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content34% 
IMG OID638073387 
Product30S ribosomal protein S21 
Protein accessionYP_679976 
Protein GI110639766 
COG category 
COG ID 
TIGRFAM ID[TIGR00030] ribosomal protein S21 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.616892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.237607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTAA TCAACATCAA AGAAAACGAG CCAATAGATA AAGCGTTAAA GCGTTTCAAA 
AAGAAATTTG AAAAAACAGG TGTTTTAAAG GCACTTCGTG CTCGTTCTTA CTACGAGAAA
AAATCAGTAC GTTTAAGAAA AGAAGTAATT CGTGCTTCTT ACCGTCTTAA ATTACAGGAA
GCTGCTTCAA ACGACTAA
 
Protein sequence
MIVINIKENE PIDKALKRFK KKFEKTGVLK ALRARSYYEK KSVRLRKEVI RASYRLKLQE 
AASND