| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3339 |
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| Symbol | yxkH |
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| ID | 4184589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3809543 |
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| End bp | 3810847 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638073328 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_679918 |
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| Protein GI | 110639708 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00946214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAAAAG TACTTCTATC TCTTTCTGCC TGTCTTATAC TGACAATGCA TACATTGCAG
GCGCAGATAC CAGGCGGCAT CTGCAATTGG GACAACGATA AAAAAGCTGC CATTGTATTG
ACCTTTGATG ACTGGTCTCC GGGGCATTAT CCCATTGCTG TGCCGGAATT GAAAAGCCGG
AATCTTGTCG GTACCTTCTT TGCAACCAAC TCAACCGGAT CATATTCCTG GCCGCAAATA
AGAATTGCTG CCGCTGATGG CAATGAAATC GGGAACCATA CAAAAACCCA TCCGCACCTG
ACAACATTAA CGCCTGCACA GCTGAATGAT GAAATACGGG CCATGAAAAT TAGTATTGAC
CAAAATATCA CTACACAAAA AGTTACAACC TTTGCCTATC CGTTCGGTGA ATACAATGCT
GCTGTTTTAG ATTCCGTAAA AAAAAGCGGA CACATTGCTG CACGTGGTGT ACAGCCCGCA
TCCAGCTACC CGTACAATTT TGCAGCAACG GAAAATGCGT ATTACAACAT AGCCACGTAT
GCCATGGGAC CAACAGTTAC GATAGCAACC TTTAACGGAC TGGTACAAAA TGTAACCACA
GGCGGCGGTT TGCTGACTTT CTTATACCAT AGCATTGATG ATGCAACCAC TAGCCATGGC
GACAACTGGT ATTCGCAGGT AAAGCAGGCT GATCTGCAGG CACAGCTGGA CAAATTAGTT
TCTGTTAAAG ATGTTGTATG GATCACCACA TTTTCACAGG CTATAAAATA CCACAAAGAA
AAAGCCTGTG CCACATTGAC CCAGACACAG GTACCTGATG GTACCACCTG GAAATTTACA
CTTACAGATA CGCTTTCAAA CAACACCATA TACAATCAGC CTTTAAGTAT TAAACTGAAG
ATGCATGGCG TAAACTATAT GTCTGTATTA CAAAACGGTG TAGCTCTCCC AATCGACCGC
ATTCGCAACG ATAGTATTTT GTTTCATGCT GTTCCGGATA AAGGTGAAAT CGTATTGACA
ACACAACTCA TTACATCAAC CAAAAATATG CAGGCAGCAA GCGATAACAT TACGGTTTCA
CCGGTACCAA GCAATGGGCT GATCACCATT CATGCCGCTA AAACAATCAA TCCTTCTTCA
GTTATAGTTT CTGATTTAGC CGGCAATATA TTATTTCATC AACCACATGT ATCCTTTGCT
GATGATGTAC AGATTGATCT GAGCGGATTC AAAGAAGGAG CCTATTTAAT TCATATTTAC
GAAGGAGAAC AGCTGATCAC AAAAAAAGCA ATACGCGTAA ACTAA
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| Protein sequence | MKKVLLSLSA CLILTMHTLQ AQIPGGICNW DNDKKAAIVL TFDDWSPGHY PIAVPELKSR
NLVGTFFATN STGSYSWPQI RIAAADGNEI GNHTKTHPHL TTLTPAQLND EIRAMKISID
QNITTQKVTT FAYPFGEYNA AVLDSVKKSG HIAARGVQPA SSYPYNFAAT ENAYYNIATY
AMGPTVTIAT FNGLVQNVTT GGGLLTFLYH SIDDATTSHG DNWYSQVKQA DLQAQLDKLV
SVKDVVWITT FSQAIKYHKE KACATLTQTQ VPDGTTWKFT LTDTLSNNTI YNQPLSIKLK
MHGVNYMSVL QNGVALPIDR IRNDSILFHA VPDKGEIVLT TQLITSTKNM QAASDNITVS
PVPSNGLITI HAAKTINPSS VIVSDLAGNI LFHQPHVSFA DDVQIDLSGF KEGAYLIHIY
EGEQLITKKA IRVN
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