Gene CHU_3338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3338 
Symbol 
ID4184588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3807594 
End bp3809519 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content37% 
IMG OID638073327 
Producthypothetical protein 
Protein accessionYP_679917 
Protein GI110639707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0108944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTGCAC AGAGTCTGTT TAACCTTTTA ACTGCTTATC TGATGAACCG ATTTCCTGTT 
ATGTTTATCT GGCTGCTATG TACAGTCCAT GCACATGCAT CGGATGTACT TATACTATCC
AACGCGCAGG TAAATGGCAT ATCGTTATCC GATAATTACA TAACCATACT GGAAGATACA
ACAGCAGCCT TTTCCATTAC TGAAGTTATT GCCGCTGATT CTGCTCAACA GTTTAAACAG
GCATCGTATA ATTTCAACAT ACATCCGGCT TCTGTTTATT GGATAAAGTT CACAGTAAAA
AATGAAGGAG ATGTATTTAC CCAATATGTA ATAGAAAACT ACTATGCGCA TGCAAAAGAG
TTTTCTGTTT TTTATCAGGA ACATGGAAAA CTCTTTCAGC AAAAAACCGG TGAATATGTA
ACCTATAAAA ACAGAAACTT TTCCCATAAA AATTTAGTAC TTGATCTTCC TGCACCGCAG
GCAGGAAATG AGCGGACGTT TTACCTCAAG GTTTATTCCG GACTATATGT CAATTTTAAT
TTTGTTATAA ACAACCAGCA TTCCTTTACC CATTACAGTA CAACCGAATA TTTCTTTTTA
GGAATTTATT ACGGTATCAT TTTACTGTTG ATTTTGTACA ACATCATTTT GTTTTTTACC
ATCCGTGCAA GGCTTTATAT CCTGTATATT TTTTATCTTC TTTCAGGTAT GCTTATTTCT
ATTAATGAAG ATAAGCTGGG TTATCAGTAT TTATGGCCTG AACAGCCAGA GTTGAATCCG
TTGCTTTCGT TTCATGTTGC ACCTGTATTG CTGGTGTTCT GCTTCATTGT GTATGCATCA
AATTTTCTGG AGCTGTATAA AAGAATCAAA TCTTTATTTT TTTTAGTATG GGCTTCGTTT
GCTTTTTACA TCGCGGTGTT CATACTGAAT TTCTATTTTC CGTTATTACT TGCAATACGG
ATACTGACCC CATTGCCTTT CCTGATGGTC TTCATCTCAA CAATCATTAT TTATAGTAAG
GGATATAAAT CTGCGCGATT TTTTATTCTT GGTGCCGGAC TAATTTTAAC AAGTATCATT
TTAATTCAGC TGCGTGCTCT GGCTATTATC ATGGGTTCAA TTTTCACCGT TTACATTTTC
AACTACAGCT TAATTATTGA GTCCATTATT TTATCTATCG CCTTATCAGA CAGGATCAGC
ATCATACGAA AAGAAAAAGA AGCGGCACAG GCCAGTGTGC TTAAGGAACT AAAAGAAAAA
GAACAACTGC AGATTGAGGT GAACAAACAG CTGAAGGAAA AACAGGAAAT GCAGCAACGC
ATAAATCAGG AGCTTGAAAT AAAAGTAACC GAACGGACCA GAGAATTAAG CAGCCGCTCT
GAAGAGTTAG AGATTGCAAA CGTTAAGCTG CAATCACTGA TCGAACAAAC CAACAGGATG
AACATAAAAT TAGATCTCGA CAATTGGGAG CTGAAAAAAA ATGTGCGTCA TGAACTGGTA
CAACGTATCA CCGGACAGGA AGTAAGCATC GATATATTCA AAACTGTTTT TAAAGATGAT
ATAACCTGCC TGCGTTTTTT AGATGAATTG AAATGGAGTA ATGGTTTTGT TTGTACTAAA
TGCCAATACA CAAAATACAA AGAAGTAGAG CATACCTATG TGCGCAAGTG CAGCCGTTGC
AGCCATCCGG AGTCTGTTAC AGCAAATACC TTTCTTCATG GAATAAAATT TTCCATCACG
CATGCCTTAT ACCTCATCTA TCTCATTCAT ACAAGAAAAG GCGATGTTAA ACTTGAACAC
ATTTCTGAAA TAGCCGGTAT CAGTATTGTT TCCGCTTCTA AATTCCGGGC AAAGGTTATG
GAAAAAACGC TGCTGCTGGA AAAGAAACAG AAAATTGTTA CCTGGGAAGA AATAATACTA
AACTGA
 
Protein sequence
MIAQSLFNLL TAYLMNRFPV MFIWLLCTVH AHASDVLILS NAQVNGISLS DNYITILEDT 
TAAFSITEVI AADSAQQFKQ ASYNFNIHPA SVYWIKFTVK NEGDVFTQYV IENYYAHAKE
FSVFYQEHGK LFQQKTGEYV TYKNRNFSHK NLVLDLPAPQ AGNERTFYLK VYSGLYVNFN
FVINNQHSFT HYSTTEYFFL GIYYGIILLL ILYNIILFFT IRARLYILYI FYLLSGMLIS
INEDKLGYQY LWPEQPELNP LLSFHVAPVL LVFCFIVYAS NFLELYKRIK SLFFLVWASF
AFYIAVFILN FYFPLLLAIR ILTPLPFLMV FISTIIIYSK GYKSARFFIL GAGLILTSII
LIQLRALAII MGSIFTVYIF NYSLIIESII LSIALSDRIS IIRKEKEAAQ ASVLKELKEK
EQLQIEVNKQ LKEKQEMQQR INQELEIKVT ERTRELSSRS EELEIANVKL QSLIEQTNRM
NIKLDLDNWE LKKNVRHELV QRITGQEVSI DIFKTVFKDD ITCLRFLDEL KWSNGFVCTK
CQYTKYKEVE HTYVRKCSRC SHPESVTANT FLHGIKFSIT HALYLIYLIH TRKGDVKLEH
ISEIAGISIV SASKFRAKVM EKTLLLEKKQ KIVTWEEIIL N