Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3338 |
Symbol | |
ID | 4184588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3807594 |
End bp | 3809519 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638073327 |
Product | hypothetical protein |
Protein accession | YP_679917 |
Protein GI | 110639707 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0108944 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGATTGCAC AGAGTCTGTT TAACCTTTTA ACTGCTTATC TGATGAACCG ATTTCCTGTT ATGTTTATCT GGCTGCTATG TACAGTCCAT GCACATGCAT CGGATGTACT TATACTATCC AACGCGCAGG TAAATGGCAT ATCGTTATCC GATAATTACA TAACCATACT GGAAGATACA ACAGCAGCCT TTTCCATTAC TGAAGTTATT GCCGCTGATT CTGCTCAACA GTTTAAACAG GCATCGTATA ATTTCAACAT ACATCCGGCT TCTGTTTATT GGATAAAGTT CACAGTAAAA AATGAAGGAG ATGTATTTAC CCAATATGTA ATAGAAAACT ACTATGCGCA TGCAAAAGAG TTTTCTGTTT TTTATCAGGA ACATGGAAAA CTCTTTCAGC AAAAAACCGG TGAATATGTA ACCTATAAAA ACAGAAACTT TTCCCATAAA AATTTAGTAC TTGATCTTCC TGCACCGCAG GCAGGAAATG AGCGGACGTT TTACCTCAAG GTTTATTCCG GACTATATGT CAATTTTAAT TTTGTTATAA ACAACCAGCA TTCCTTTACC CATTACAGTA CAACCGAATA TTTCTTTTTA GGAATTTATT ACGGTATCAT TTTACTGTTG ATTTTGTACA ACATCATTTT GTTTTTTACC ATCCGTGCAA GGCTTTATAT CCTGTATATT TTTTATCTTC TTTCAGGTAT GCTTATTTCT ATTAATGAAG ATAAGCTGGG TTATCAGTAT TTATGGCCTG AACAGCCAGA GTTGAATCCG TTGCTTTCGT TTCATGTTGC ACCTGTATTG CTGGTGTTCT GCTTCATTGT GTATGCATCA AATTTTCTGG AGCTGTATAA AAGAATCAAA TCTTTATTTT TTTTAGTATG GGCTTCGTTT GCTTTTTACA TCGCGGTGTT CATACTGAAT TTCTATTTTC CGTTATTACT TGCAATACGG ATACTGACCC CATTGCCTTT CCTGATGGTC TTCATCTCAA CAATCATTAT TTATAGTAAG GGATATAAAT CTGCGCGATT TTTTATTCTT GGTGCCGGAC TAATTTTAAC AAGTATCATT TTAATTCAGC TGCGTGCTCT GGCTATTATC ATGGGTTCAA TTTTCACCGT TTACATTTTC AACTACAGCT TAATTATTGA GTCCATTATT TTATCTATCG CCTTATCAGA CAGGATCAGC ATCATACGAA AAGAAAAAGA AGCGGCACAG GCCAGTGTGC TTAAGGAACT AAAAGAAAAA GAACAACTGC AGATTGAGGT GAACAAACAG CTGAAGGAAA AACAGGAAAT GCAGCAACGC ATAAATCAGG AGCTTGAAAT AAAAGTAACC GAACGGACCA GAGAATTAAG CAGCCGCTCT GAAGAGTTAG AGATTGCAAA CGTTAAGCTG CAATCACTGA TCGAACAAAC CAACAGGATG AACATAAAAT TAGATCTCGA CAATTGGGAG CTGAAAAAAA ATGTGCGTCA TGAACTGGTA CAACGTATCA CCGGACAGGA AGTAAGCATC GATATATTCA AAACTGTTTT TAAAGATGAT ATAACCTGCC TGCGTTTTTT AGATGAATTG AAATGGAGTA ATGGTTTTGT TTGTACTAAA TGCCAATACA CAAAATACAA AGAAGTAGAG CATACCTATG TGCGCAAGTG CAGCCGTTGC AGCCATCCGG AGTCTGTTAC AGCAAATACC TTTCTTCATG GAATAAAATT TTCCATCACG CATGCCTTAT ACCTCATCTA TCTCATTCAT ACAAGAAAAG GCGATGTTAA ACTTGAACAC ATTTCTGAAA TAGCCGGTAT CAGTATTGTT TCCGCTTCTA AATTCCGGGC AAAGGTTATG GAAAAAACGC TGCTGCTGGA AAAGAAACAG AAAATTGTTA CCTGGGAAGA AATAATACTA AACTGA
|
Protein sequence | MIAQSLFNLL TAYLMNRFPV MFIWLLCTVH AHASDVLILS NAQVNGISLS DNYITILEDT TAAFSITEVI AADSAQQFKQ ASYNFNIHPA SVYWIKFTVK NEGDVFTQYV IENYYAHAKE FSVFYQEHGK LFQQKTGEYV TYKNRNFSHK NLVLDLPAPQ AGNERTFYLK VYSGLYVNFN FVINNQHSFT HYSTTEYFFL GIYYGIILLL ILYNIILFFT IRARLYILYI FYLLSGMLIS INEDKLGYQY LWPEQPELNP LLSFHVAPVL LVFCFIVYAS NFLELYKRIK SLFFLVWASF AFYIAVFILN FYFPLLLAIR ILTPLPFLMV FISTIIIYSK GYKSARFFIL GAGLILTSII LIQLRALAII MGSIFTVYIF NYSLIIESII LSIALSDRIS IIRKEKEAAQ ASVLKELKEK EQLQIEVNKQ LKEKQEMQQR INQELEIKVT ERTRELSSRS EELEIANVKL QSLIEQTNRM NIKLDLDNWE LKKNVRHELV QRITGQEVSI DIFKTVFKDD ITCLRFLDEL KWSNGFVCTK CQYTKYKEVE HTYVRKCSRC SHPESVTANT FLHGIKFSIT HALYLIYLIH TRKGDVKLEH ISEIAGISIV SASKFRAKVM EKTLLLEKKQ KIVTWEEIIL N
|
| |