| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3336 |
|---|
| Symbol | |
|---|
| ID | 4184586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 3804735 |
|---|
| End bp | 3805838 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638073325 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_679915 |
|---|
| Protein GI | 110639705 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGGAAT ATTTTTATAA GAAGCGATTT CGCATTCAGT TTATTGCGGT TATCACATTT
TTGCTGATAA GTTGTTTCGC TGCATTTTTG GTTGAAAGAA AGGAAACCAT AAACCTGCTG
GATTCAAAAG AATATATCAT TGAACCTTTT TCAGATGTTT GGGACGGAGG ATATTCAGAA
ACGAAAATAA TATCCAGGAC AAACAATGCA CTAACATTCA GCTGCTGCCT GAAAAAAGGC
CTGATGTATC CATATGCAGG CATTCATATC CGCAAAACGG ACAGCACATT TTTTAGTTTG
AAAAACTATA CATTAAAAAT GCACCTCTAT AGTCAGGAAA AACAACGTCT GGCAATACGC
ATTTATAATT TTAACAAAGG AATCCATGAT TCGACCGTTA GAAATTCATT CCCGCTTTAT
CATAATATTT ACATTGTTGA GAAAGCCGAA AATAAGCTGA AAATAGCATT TGACAGTTTT
ACAACCATTC CGGAATGGTG GTACGCAAAT AATCATATTG CCGAATCGGA CATTAAATCC
TGGGATAAAG ATTCTGTTGG GTATATATCT GTTTTTAGTG ATCCCGGGTT TATTATTAAT
AAAGAACGGG TCTTTAAAAT TACACAGCTT GAATTGGCAG GTGATTATAG CAGCTTATAT
CGGGTACTCG CTCTTTTTGT AAGCACTGTT TTAATTGTAT TTATTGGTAT ACATAGTATA
CTATATCAAA AACAGAAAAG AATACAGTTA ACCGTAAAAT ATTCAGAGGA TTTCGATTTT
GAAACAAAAG ATGAGGATTT GAAAAGCCAG ATTCATGCAT TTATATCCGA GAATTACGCA
AACAGTGAAT TGAAAGCTTC AGATCTGGCC AACCAGTTAC ATGTTCCCGA ATATAAAATA
GGGGAGATAT TAAAAGAGAA TGTGGGAATG ACTTTTAAAT CATTTTTAAA TCATACAAGA
GTTGAAGCCG CAAAATTATA TCTAAAAAAT TCTTCGTATT CGATTTCTGA AATAGCATAC
AAAACAGGTT TCAATTCACC TTCCAGCTTT AACCGGGTTT TTAAAGAAAT TGTTAAGCAA
GCGCCCGGAG AATTTAAAAA TTAG
|
|---|
| Protein sequence | MKEYFYKKRF RIQFIAVITF LLISCFAAFL VERKETINLL DSKEYIIEPF SDVWDGGYSE
TKIISRTNNA LTFSCCLKKG LMYPYAGIHI RKTDSTFFSL KNYTLKMHLY SQEKQRLAIR
IYNFNKGIHD STVRNSFPLY HNIYIVEKAE NKLKIAFDSF TTIPEWWYAN NHIAESDIKS
WDKDSVGYIS VFSDPGFIIN KERVFKITQL ELAGDYSSLY RVLALFVSTV LIVFIGIHSI
LYQKQKRIQL TVKYSEDFDF ETKDEDLKSQ IHAFISENYA NSELKASDLA NQLHVPEYKI
GEILKENVGM TFKSFLNHTR VEAAKLYLKN SSYSISEIAY KTGFNSPSSF NRVFKEIVKQ
APGEFKN
|
|---|
| |