| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3296 |
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| Symbol | trpB |
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| ID | 4186928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3768041 |
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| End bp | 3769237 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638073288 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_679878 |
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| Protein GI | 110639668 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.801075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTATA ACGTAGATAA AAAAGGATAC TATGGAAATT TCGGTGGAGC GTTTATTCCC
GAAATGCTGT ATCCCAATGT TGAAGAACTT CGTGAAAATT ATTTAAAGAT TATCAACGAT
GAATCTTTTC AAAAGGAATA TCAAGACCTC CTTAAAAATT ATGTAGGCAG ACCTACTCCT
TTGTATTTGG CAAAACGCTT ATCTGAAAAA TATAACGCTA CCATTTATTT AAAGCGTGAA
GATCTGTGTC ACACAGGTGC ACACAAGATC AACAATACGA TCGGCCAGAT CCTGATCGCA
AAGCGTATGG GTAAAACCCG TATTATTGCT GAAACAGGTG CCGGCCAGCA CGGTGTTGCA
ACGGCTACAG CCTGTGCATT AATGGGCATG CCGTGTGTGG TGCATATGGG CGCTGTTGAC
ATGGACAGAC AAAAACCAAA TGTTGAGCGC ATGCGCATGT TAGGTGCTGA AGTTATACCT
GCTATGACCG GTAGCCGCAC GCTGAAAGAT GCGACAAACG AAGCGTTACG CGATTGGATC
AATAACCCGG TTGATACATT CTATATCATT GGTTCTGTTG TGGGGCCGCA CCCATATCCG
GATATGGTTG CCCGCTTACA GGCAGTAATC AGCGAAGAGA TTATTGATCA GCTGCAGGAA
ACAACCGGTA ATCCTGATCC TACACATGTG ATTGCATGCG TTGGCGGCGG CAGTAATGCA
GCCGGTTCGT TTTATCATTT CCTTGATCGC CCGAATGTAG AATTGATTGC TGTTGAAGCT
GCAGGTGAAG GTGTATATTC CGGTTATTCT GCCGCAACTA CGTTCTTAGG TAAACCAGGT
GTGTTGCACG GCAGCAAAAC CTTGCTGATG CAGACAGAAG ATGGTCAGGT TGTAGAACCA
CATTCTATTT CTGCAGGCCT GGATTATCCG GGCATCGGGC CCATGCATGC CAACTTATTT
GAAACCGGCC GTGCAAAATT CTTTAGCATA ACAGATAAAG AAGCGTTCCA GGCCGCATTC
ATGCTGGCTC GTACAGAAGG CATCATTCCT GCTTTGGAAT CAGCGCATGC AGTGGCCGCC
CTTGAAAATA TTGCATTGAA AAAATCTGAT GTGGTAGTTG TCAATTTATC CGGCCGCGGC
GATAAAGATA TGATGACATA CATTACAAGA AAAGAAGAAT TCTTAACAAA CAACTAA
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| Protein sequence | MNYNVDKKGY YGNFGGAFIP EMLYPNVEEL RENYLKIIND ESFQKEYQDL LKNYVGRPTP
LYLAKRLSEK YNATIYLKRE DLCHTGAHKI NNTIGQILIA KRMGKTRIIA ETGAGQHGVA
TATACALMGM PCVVHMGAVD MDRQKPNVER MRMLGAEVIP AMTGSRTLKD ATNEALRDWI
NNPVDTFYII GSVVGPHPYP DMVARLQAVI SEEIIDQLQE TTGNPDPTHV IACVGGGSNA
AGSFYHFLDR PNVELIAVEA AGEGVYSGYS AATTFLGKPG VLHGSKTLLM QTEDGQVVEP
HSISAGLDYP GIGPMHANLF ETGRAKFFSI TDKEAFQAAF MLARTEGIIP ALESAHAVAA
LENIALKKSD VVVVNLSGRG DKDMMTYITR KEEFLTNN
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