Gene CHU_3216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3216 
Symbol 
ID4184741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3664635 
End bp3665036 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content31% 
IMG OID638073209 
Producttwo-component response regulator, CheY-like 
Protein accessionYP_679799 
Protein GI110639589 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.233496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.450794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATA AAGCGACTAT TTACATCATC GATGATGATG AAATTTTTCA GTTCATTACC 
CGGAAATCCT TTGAACGTCT TGAAAGAAAT GATAATCTAT TCTTTTTTTT GAATGGGGAA
GATGCATTAA GTTCAATTAA AGAGGCAATT TCAGGTAATA AGCCTTCTCC TGATTTAATA
TTTTTAGACA TCAATATGCC TATAATGGAT GGCTGGGATT TTTTGGCCGA ATTAATTAAG
CTGGAAGGAG AAATGAAAAA AACACCGCAG ATTTATATGG TGAGCTCTTC AATCGATGAT
AAAGATTTAA TTAAGTCGAA AACCTATAAC ATGATAAAAG ACTATATTGT GAAGCCTATT
AAAGACACAC ACATTAAAGA ATTGTTGAAT AATTTAAATT GA
 
Protein sequence
MADKATIYII DDDEIFQFIT RKSFERLERN DNLFFFLNGE DALSSIKEAI SGNKPSPDLI 
FLDINMPIMD GWDFLAELIK LEGEMKKTPQ IYMVSSSIDD KDLIKSKTYN MIKDYIVKPI
KDTHIKELLN NLN