| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3145 |
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| Symbol | rpsE |
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| ID | 4183623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3590211 |
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| End bp | 3590729 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638073133 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_679727 |
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| Protein GI | 110639518 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00134617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.549276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAG TCAACGTTAA AACGGTAAAA GCGAGTGAAA TCGAGCTTAA AGAGCATGTT
GTTGCTATTA ACCGCGTTGC TAAAGTAGTT AAAGGTGGAC GTCGTTTCAG TTTTTCTGCA
ATAGTTGTAG TAGGAGATGG ACACGGTGTT GTTGGTCATG GTTTAGGTAA AGCAAATGAA
GTTACAGATG CGATTACTAA AGCAATCGAC GATGCCAAAA AGAATCTTAT AAAAGTTCCT
GTTATTAACG GAACTCTACC ACATGAAATG ATTGGTAAAT ACAGTGGTGG TTTTGTATTT
GTTAAGCCAG CTGCTCCAGG TACTGGAGTA ATTGCAGGTG GTGCGATGCG TGCTGTATTT
GAAAGTGCTG GTATTAAAGA CGTTTTAGCA AAATCTAAAG GTTCTTCAAA CCCTCACAAC
GTAGTAAAAG CAACAATCGA CGCATTAGTT AAAATGAGAG CTCCTCATAA AGTAGCTATG
CAGCGCGGTG TTGCTATGAG TAAAGTATTT AATGGTTAA
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| Protein sequence | MSQVNVKTVK ASEIELKEHV VAINRVAKVV KGGRRFSFSA IVVVGDGHGV VGHGLGKANE
VTDAITKAID DAKKNLIKVP VINGTLPHEM IGKYSGGFVF VKPAAPGTGV IAGGAMRAVF
ESAGIKDVLA KSKGSSNPHN VVKATIDALV KMRAPHKVAM QRGVAMSKVF NG
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