Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3144 |
Symbol | rpmD |
ID | 4183622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3590022 |
End bp | 3590198 |
Gene Length | 177 bp |
Protein Length | 58 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638073132 |
Product | 50S ribosomal protein L30P |
Protein accession | YP_679726 |
Protein GI | 110639517 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00426449 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.517649 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAG TTAAAATTAC TCAAGTTGTA AGTGCAATTA AAAAAACTGA TAACCAAAAA AGAGTATTAG CATCTTTAGG TTTAGGAAAG ATTAATTCTT CAGTTGAACA AGAACTTACA CCTTCAATAA AAGGAATGCT AAATAAGGTA AATCATTTAG TAGTTGTTAG CGAGTAA
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Protein sequence | MAKVKITQVV SAIKKTDNQK RVLASLGLGK INSSVEQELT PSIKGMLNKV NHLVVVSE
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