| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3143 |
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| Symbol | rplO |
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| ID | 4183621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3589564 |
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| End bp | 3590016 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638073131 |
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| Product | 50S ribosomal protein L15 |
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| Protein accession | YP_679725 |
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| Protein GI | 110639516 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0200] Ribosomal protein L15 |
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| TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00353005 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.335767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTAC ATACATTAAG ACCTGCAAAA GGTTCTGTAA AAACATCAAA ACGTATAGGT
AGAGGTACTG GATCTGGTAG AGGCGGTACA TCAACTAAAG GTCATAAAGG AGCCAAATCC
AGATCGGGTT ATTCTTCTAA AATTGGTTTT GAAGGTGGTC AAATGCCGTT ACAACGTCGT
TTACCTAAGT TTGGATTTAA ACCTCTGAAC AAAATTGAAT TCAAGCCAAT CAATCTTGAC
GAATTACTTG AATTGATAGA AAAAACAGGT GCTTCTGTTA TTGATACAGC TTTAATGAAC
CAGAATGGTT TGATCGGTAA AAACGATAAA GTTAAAGTTC TGGCAAGAGG TGAAGTTAAA
TCAATTAAGG CAGAAATTAT TGCTCATGCA TTTTCGGCTT CAGCTTCTGA AGCAATCACA
AATGCTGGCG GTAAAGTTAC TCTTATAGGC TAA
|
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| Protein sequence | MKLHTLRPAK GSVKTSKRIG RGTGSGRGGT STKGHKGAKS RSGYSSKIGF EGGQMPLQRR
LPKFGFKPLN KIEFKPINLD ELLELIEKTG ASVIDTALMN QNGLIGKNDK VKVLARGEVK
SIKAEIIAHA FSASASEAIT NAGGKVTLIG
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