| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3115 |
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| Symbol | deaD |
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| ID | 4186796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3557519 |
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| End bp | 3558892 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638073103 |
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| Product | inducible ATP-independent RNA helicase |
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| Protein accession | YP_679697 |
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| Protein GI | 110639488 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACATTCT CCGACCTGGG TTTAAATGCT GCGCTACTTC AATCCCTTAG TGAAAATAAT
ATTTCTTCGC CATCAGAAAT TCAGCAAAAA GCAATTCCTG TTATTCTGAA TTCTACTAAA
AATGTAGTAG GCGTTGCACA AACCGGAACA GGTAAAACAG CTGCATTTGG CTTGCCCGTA
TTACAACAGA TCAATCCTTC TTTACAGCAA ACACAGGTAC TGGTGCTGGT ACCCACCAGA
GAACTTGGCC AGCAGGTTGC AAAAGATCTG TTTGTATTCT CCCGCTACAT CGTGCGCATA
CATACAGAAG CCGTTTACGG CGGGAAAAAG ATTGAAGAGC AAATAAAAAA GCTTGAAACA
CCAAAACACA TTCTGGTTGC AACTCCCGGC CGGTTGCTTG ACCTGATTGC GCGAAAGGCG
GTGAACTTAA GTAACCTGAA ATACCTGATC CTGGATGAAG CCGATGAAAT GCTCAATATG
GGCTTTCTTC CGGATATTGA TAAGATCATG AAGATTGCAA AGCCCACTGC ACGTAAGCTT
TTGTTCACCT CAACACTTGG TTCTGAACTT AAGCTGATCA TCCGGGAATA TTTAGGAACC
GACATCGAAG AGATTCGCAT AAAGCCGCAG GAGTATGTAA ATAGAAATAT TGAACATCAG
TACCTGGCAT ATCAATACGG ATATAAATTA GAATATCTGA AAGCATTTTT GCTGAAGCAT
AGCAATGAAC GCGGCATCAT ATTCTGCCGT ACACAGGCCG CGGCTAAATT ACTGGGGCAG
CAGCTGGCCG GTTTTGATAT TGTTGTCGGG TCACTTTACG GCGACCTCAA TCAATATGAG
CGTACAAAAG TGATGCATGC ATTTAAAGAC AAACGCATTG AGGTACTTAT TGCAACGGAT
ATTGCAGCCC GGGGCATTGA TGTGAGCGAT CTGAATTATG TGATTCATTA TCATTTGCCG
GATAACGAAG CGCAATATGT TAACCGCAGC GGAAGAACGG CGCGCGCCGG AAAAAAAGGC
AAATCCATTG CCTTGTTACA AAGCGATGAA CTATATCATA AAGATGATTT TGAAGATGCG
TTACGCATCA GGTTTGAACC CATAAAGCTG GATATAACGA TTGATAAAAA AGAATCGTGT
CCGGTAAAAA TGACAATCAA TGTAGGTACA CGACATGAAC AAACGCCGGA GTCGCTGAAA
CAATTCTTAA TGCTTCAATC CGGTGTGAAG GAAGAAGCCA TACAAAATGT ACTTGTCTAT
CGCGCACATG CAACGTTTGA TATAGATTCA AAATATCAGA GTCAGTTGAT TAATAACATT
CATCAGACAA AACATTTTCA TCAGCGGGTG CTTATTGAAG AAACGGCTAA ATAA
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| Protein sequence | MTFSDLGLNA ALLQSLSENN ISSPSEIQQK AIPVILNSTK NVVGVAQTGT GKTAAFGLPV
LQQINPSLQQ TQVLVLVPTR ELGQQVAKDL FVFSRYIVRI HTEAVYGGKK IEEQIKKLET
PKHILVATPG RLLDLIARKA VNLSNLKYLI LDEADEMLNM GFLPDIDKIM KIAKPTARKL
LFTSTLGSEL KLIIREYLGT DIEEIRIKPQ EYVNRNIEHQ YLAYQYGYKL EYLKAFLLKH
SNERGIIFCR TQAAAKLLGQ QLAGFDIVVG SLYGDLNQYE RTKVMHAFKD KRIEVLIATD
IAARGIDVSD LNYVIHYHLP DNEAQYVNRS GRTARAGKKG KSIALLQSDE LYHKDDFEDA
LRIRFEPIKL DITIDKKESC PVKMTINVGT RHEQTPESLK QFLMLQSGVK EEAIQNVLVY
RAHATFDIDS KYQSQLINNI HQTKHFHQRV LIEETAK
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