Gene CHU_3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3108 
Symbolppa 
ID4186558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3549818 
End bp3550348 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content37% 
IMG OID638073096 
Productinorganic pyrophosphatase 
Protein accessionYP_679690 
Protein GI110639481 
COG category[C] Energy production and conversion 
COG ID[COG0221] Inorganic pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCTT GGCATGACGT TTCTTTTGGA GATGAATCTC CATCAATAGT TCAATGTATC 
ATTGAAATCC CGAGCGGAAG TAAAGCTAAA TATGAATTAG ATAAAGAATC TGGTTTATTA
CGTTTAGACC GCGTACTTTT CTCTTCTGTA CACTACCCTG CCAACTACGG TTTTATCCCA
CGTACATACT GCGACGATAA AGATCCATTG GATGTATTGG TTATTTCTCA GGTAGAAGTA
GTTCCTTTCT GTATTGTAAA CGCAAAAGTA ATCGGTGTTA TGCGTATGCT TGACGGCGGT
GAAAAAGATG ATAAAATCAT TGCTGTAGCT GCTGATGATA TCTCCGTAAA ACACTACAAT
GATATCAGCG ACTTGCCACC ACACACCATT TTAGAAGTAC AGCGTTTCTT TGAAGACTAC
AAAAAACTTG AAAATAAAAA AGTTGTTGTT GAGGATTTCT TAGGCAGAGA AGAAGCATTG
CGCATTGTGA ACGAAAGCAT TGAACTTTAC AACGTTACGT TCAAAAAATA A
 
Protein sequence
MNPWHDVSFG DESPSIVQCI IEIPSGSKAK YELDKESGLL RLDRVLFSSV HYPANYGFIP 
RTYCDDKDPL DVLVISQVEV VPFCIVNAKV IGVMRMLDGG EKDDKIIAVA ADDISVKHYN
DISDLPPHTI LEVQRFFEDY KKLENKKVVV EDFLGREEAL RIVNESIELY NVTFKK