Gene CHU_3092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3092 
Symbol 
ID4183960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3532591 
End bp3533034 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content41% 
IMG OID638073080 
Producthypothetical protein 
Protein accessionYP_679674 
Protein GI110639465 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCAC AGGGACTAAA AAACAAATAC GAAGCATTCA GAAATGCATC TATTAAATTT 
CAGGACGTAG CATTATTGGC TATGCGATTG GTGTTGGCAT ACGGATTTTT TCATCCGGCT
GTGATGAAGG TTAAAAATAT CAATGGTGTG ATAGCATGGT TTGCCAGCCT TGGTATGCCG
TTGCCCGCTT TAAATGCGTA TCTGGCAACC GCTGCAGAAA TATTGGGTGT TATTTTACTG
ACCATTGGTT TAGGTGTGCG GGTTTTTACG CTTCCGTTAA TTATTGTTAT GATTGTTGCT
ATTGTGACGG TACATTGGTC CAATGGTTTT GAATCCGGAA ATAATGGGTT TGAAATTCCG
CTGTATTATA TCATTATGCT GTTTCTATTA CATACACACG GTTCCGGGAA ATACAGCGCA
GACGCGCTGC TGCGCAAAAA ATAA
 
Protein sequence
MISQGLKNKY EAFRNASIKF QDVALLAMRL VLAYGFFHPA VMKVKNINGV IAWFASLGMP 
LPALNAYLAT AAEILGVILL TIGLGVRVFT LPLIIVMIVA IVTVHWSNGF ESGNNGFEIP
LYYIIMLFLL HTHGSGKYSA DALLRKK