Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3088 |
Symbol | argH |
ID | 4183956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3526873 |
End bp | 3528210 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638073076 |
Product | argininosuccinate lyase |
Protein accession | YP_679670 |
Protein GI | 110639461 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0165] Argininosuccinate lyase |
TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.454701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTGT GGCAAAAAGA TACGGAAGTA AATAAAGACA TTGAGCGTTT CACTGTTGGA AAAGACCGCG AGATGGATCT GTTCCTTGCT CCGTTCGATG TTCTTGGTTC AATGGCACAC ATTACGATGC TGGAAAGCAT TGGCTTGATC GGTAAAGATG AACTTCCCGT ATTGCTGAAC GAACTCCGCA CGATCTATAC TGAAATAGAA GCAGGTAATT TCACCATTGA AGATGGTGTT GAAGATGTGC ACTCACAGGT TGAGCTGATC TTAACACGTC GTCTTGGTGA TCTTGGCAAG AAGATTCACA GCGGGCGTTC CCGTAACGAT CAGGTGTTGG TAGATTTGAA ATTATTCACC CGTCATGCTA TTCGTGAAAC GGTTGAAAAC ACCAAAGAAT TATTCGATAC ATTACTTTCT CAAAGCGAAA AATATAAATC GGTAATCATT CCCGGTTATA CGCACTTACA AATTGCAATG CCTTCTTCCT TTGGCTTGTG GTTTGGCGCC TATGCAGAAA GCTTAGCTGA CGACATGCAC ATGATGCTTG CAGGTTACCG CATCAGCAAT AAAAACCCAT TAGGCTCTGC AGCAGGCTAT GGTTCTTCAT TCCCATTGAA CCGTACGATG ACGACAAACC TGCTGGGCTT TGAAGAGTTA AATCACAATG TGGTTTATGC ACAGATGGGC CGCGGTAAAA CAGAAAAAAA TGTTACCGCA GCGCTTGCCT CTATTGCTGC CACTCTGGGA CGAATGTCAA TGGATGTATG CCTGTACATG AATCAGAATT TTGACTTTAT GACTTTGCCG GATGAATTGA CAACAGGTTC GAGTATCATG CCGCACAAAA AAAATCCGGA TGTATTTGAA TTGATCCGTG CGCGCTGCAA CCGCTTACAA GCTTTGCCGA ATGAAATTTC TATGATCATG GCAAACCTTC CTTCGGGTTA CCACCGCGAC ATGCAGCTGA TCAAAGAAAA TTTCATTCCT GCTTTTCAGG ATATAAATGA CTGTTTGCGT ATTGCAAATT TTATGCTGAA GCAGGTGAAA GTAAAAGAGA ATATCGTAAA AGATCCAAAG TACTTATACA TGTATAGTGT GGAAGTAGTA AATAACATGG TTCTTGAAGG AATCCCTTTC CGCGATGCAT ATAAAAAAGT GGGCGGTATG ATCGAAGACA AAACGTTTAC TGCTTTAAAT ACCATCAATC ACACACACGA AGGCAGTATC GGCAATTTAA TGCATACTGA AATTAACGTA TCCATGCAGA AAGTGCTGGA TGCATTTGAA TTCAAAAAAA TGGATATCGC CATTCAAAAG CTCTTATCCA AGGTGTAA
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Protein sequence | MKLWQKDTEV NKDIERFTVG KDREMDLFLA PFDVLGSMAH ITMLESIGLI GKDELPVLLN ELRTIYTEIE AGNFTIEDGV EDVHSQVELI LTRRLGDLGK KIHSGRSRND QVLVDLKLFT RHAIRETVEN TKELFDTLLS QSEKYKSVII PGYTHLQIAM PSSFGLWFGA YAESLADDMH MMLAGYRISN KNPLGSAAGY GSSFPLNRTM TTNLLGFEEL NHNVVYAQMG RGKTEKNVTA ALASIAATLG RMSMDVCLYM NQNFDFMTLP DELTTGSSIM PHKKNPDVFE LIRARCNRLQ ALPNEISMIM ANLPSGYHRD MQLIKENFIP AFQDINDCLR IANFMLKQVK VKENIVKDPK YLYMYSVEVV NNMVLEGIPF RDAYKKVGGM IEDKTFTALN TINHTHEGSI GNLMHTEINV SMQKVLDAFE FKKMDIAIQK LLSKV
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