Gene CHU_3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3087 
SymbolargE 
ID4183955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3525671 
End bp3526735 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content40% 
IMG OID638073075 
Productacetylornithine deacetylase 
Protein accessionYP_679669 
Protein GI110639460 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACAGA CCTTACAAAA AGATGCGATC GAGTTATTGA AGACACTGAT CAAAACAGAA 
TCATTCAGTA AAGAAGAGCA CAACACGGCA GAAATATTAA ATACATTTTT AGTTGAACGT
GGTGTTGAAA CTATTCGTGA AAAGAATAAC GTTTGGGCTT TCAACAAACA CTTCGACAAG
AACAAACCTA CCATCTTATT AAACTCACAC CACGATACGG TTAAGCCAAA CCCTGGTTAT
ACAAATGACC CATTCGAACC GATTGTGAAA GACGGCAAAC TGTTTGGACT AGGAAGTAAT
GATGCGGGTG GCTGTCTTGT TTCTTTGATC GCAACGTTCC TGCACTTCTA CAATGAAACA
AATCTAAAGT ACAACTTTTG TATTGCAGCA ACAGCTGAAG AAGAAATATC TGGTTTTGAT
GGATTAGAAT TGGTATATCC GAAATTAGGT CCGATCGATT TCGCCATTGT TGGTGAACCA
ACATTGATGG ATATTGCTGT TGCTGAAAAA GGATTAATGG TTGTAGATTG TGTAGCCATC
GGTAAGGCAG GACATGCAGC ACGTGAAGAA GGTGAAAACG CTATTTATAT CGCATTAAAA
GATATTGAAT GGATCCGCAA TTATAAATTC GAACGCGTTT CTCCGCACCT GGGACCGATG
AAAATGTCTG TAACCATTAT CAATGCCGGT TACCAGCACA ACGTTGTTCC GGAGAAATGT
CATTTCACAA TTGACGTACG TATCACAGAA GAATACAAGA ACGAAGAAGT ATTAAAGATC
ATTGATGATA ATATTCAGTC GGAAGTAAAC CCACGCTCTG TGCGTTTACG CCCATCATTC
ATTGATCCAA ATCATGAGCT TGTTCATGCT GCCATTAAAC ACGGCGCTAA AACATACGGC
TCTCCTACTA CCTCCGACCA GGCATTGATT CCCGTACCTT CTGTAAAAAT GGGGCCAGGC
AACTCTGCGC GTTCACATAC CGCCAACGAA TTTATCTGGC TGATCGAAAT CGAAGAAGGT
ATTGAAAAGT ATATTAAGGT GTTGAGTGAA ATCGTTCTAG CTTAA
 
Protein sequence
MLQTLQKDAI ELLKTLIKTE SFSKEEHNTA EILNTFLVER GVETIREKNN VWAFNKHFDK 
NKPTILLNSH HDTVKPNPGY TNDPFEPIVK DGKLFGLGSN DAGGCLVSLI ATFLHFYNET
NLKYNFCIAA TAEEEISGFD GLELVYPKLG PIDFAIVGEP TLMDIAVAEK GLMVVDCVAI
GKAGHAAREE GENAIYIALK DIEWIRNYKF ERVSPHLGPM KMSVTIINAG YQHNVVPEKC
HFTIDVRITE EYKNEEVLKI IDDNIQSEVN PRSVRLRPSF IDPNHELVHA AIKHGAKTYG
SPTTSDQALI PVPSVKMGPG NSARSHTANE FIWLIEIEEG IEKYIKVLSE IVLA