Gene CHU_3076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3076 
SymbolumuD 
ID4183944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3513896 
End bp3514315 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content43% 
IMG OID638073064 
ProductSOS mutagenesis protein UmuD 
Protein accessionYP_679658 
Protein GI110639449 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCT ACAACAGCTT ATCCCAAGCC ATACACCCGC CAATTCCATT GGCAAATGGT 
GCAGTTGCAG CCGGTTTCCC AAGTCCGGCG GGCGACTACT TAGACAGCAG GATCGATATT
TACGAATATC TTATCCAGCA CCCGACAGCA ACCTTTTATG TACGTGTAAA AGGAAATTCT
ATGATCAACG CAGCTATTCA CGATGGTGAT CTGCTGGTGG TCGACCGCTC GGTTGAACCT
AAAAACAATC AGATTGTAGT AGCTATTATT GATGGTGAAT TTACTGTCAA ACGCATCAGC
AAATACAACA ACAAACTCTA CCTCATTCCC GAGAACGAAA AATTCAAACC CATTGAGATC
ACTGAAACCA TGGACTTTGA CGTATGGGGC GTAGTAACAT ATGTGATTCA TAAACCATAA
 
Protein sequence
MQIYNSLSQA IHPPIPLANG AVAAGFPSPA GDYLDSRIDI YEYLIQHPTA TFYVRVKGNS 
MINAAIHDGD LLVVDRSVEP KNNQIVVAII DGEFTVKRIS KYNNKLYLIP ENEKFKPIEI
TETMDFDVWG VVTYVIHKP