| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3076 |
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| Symbol | umuD |
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| ID | 4183944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3513896 |
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| End bp | 3514315 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638073064 |
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| Product | SOS mutagenesis protein UmuD |
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| Protein accession | YP_679658 |
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| Protein GI | 110639449 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGATCT ACAACAGCTT ATCCCAAGCC ATACACCCGC CAATTCCATT GGCAAATGGT
GCAGTTGCAG CCGGTTTCCC AAGTCCGGCG GGCGACTACT TAGACAGCAG GATCGATATT
TACGAATATC TTATCCAGCA CCCGACAGCA ACCTTTTATG TACGTGTAAA AGGAAATTCT
ATGATCAACG CAGCTATTCA CGATGGTGAT CTGCTGGTGG TCGACCGCTC GGTTGAACCT
AAAAACAATC AGATTGTAGT AGCTATTATT GATGGTGAAT TTACTGTCAA ACGCATCAGC
AAATACAACA ACAAACTCTA CCTCATTCCC GAGAACGAAA AATTCAAACC CATTGAGATC
ACTGAAACCA TGGACTTTGA CGTATGGGGC GTAGTAACAT ATGTGATTCA TAAACCATAA
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| Protein sequence | MQIYNSLSQA IHPPIPLANG AVAAGFPSPA GDYLDSRIDI YEYLIQHPTA TFYVRVKGNS
MINAAIHDGD LLVVDRSVEP KNNQIVVAII DGEFTVKRIS KYNNKLYLIP ENEKFKPIEI
TETMDFDVWG VVTYVIHKP
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