Gene CHU_3074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3074 
Symbolera 
ID4185871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3511405 
End bp3512301 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content41% 
IMG OID638073062 
ProductGTP-binding protein Era 
Protein accessionYP_679656 
Protein GI110639447 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCACT CAGAAACACA TAAAGCGGGT TTTGTCAGTA TTATTGGCAG GCCAAATGCC 
GGTAAATCAA CCTTAATGAA TTGCCTGGTA GGAGAGCGCT TGTCTATCAT TACACCAAAA
GCCCAGACTA CGCGCCACCG CGTGATGGGT ATTATCAATG ATCCTGAATT TCAGATCGTA
TACTCAGATA CGCCCGGAGT AATTGAGCCG AAATATGAAC TTCAGAAGTC GATGATGCGT
TTTGTAGACT TTTCGCTGGA AGACGCCGAT ATGATTCTGT GGGTATTGGA TGTAAAAGAT
CCGGAAGACC ATGCACTGGT ATTGCAGCGC CTCAACAATG TAGAAGTACC GGTATTGCTG
GTGCTGAATA AAATCGATCT TTCTACGCAG GAAGAAATAG ATGCATTGGT TGAGAAATGG
AAAGCAGAAT TCCCTAAGGC AGATTCTATC TTAGCAGTAT CTGCTTTGAA AAACTTCAAT
TCGGATATGG TGTTGAAATG GGTATTGTCT CATTTACCGC AACATCCGCC GTTTTATGAT
AAAGATGAAC TGACAGATAA GCCTGAGCGT TTTTTTGCAT CGGAGATTTT CAGAGAAAAA
ATATTTAAAA ATTACAGCAA AGAAATTCCG TATAGTTCGG AAGTATTGAT AGAGTCTTTT
AAAGACCAGA AAGATCTGTT GCGCATACAG GCAGTTATTA TTGTAGAGCG TGATTCACAG
AAAGGAATTG TGATTGGACA AGGTGGTGAG GCCTTGAAAC GTACGGCGAC CCAGGCCCGT
AAATCCATGG AAGAATTCTT CGGCAAAAAA GTTTTTCTGG AAACATTTGT AAAAGTAGAG
CCAGACTGGC GAAGTAAAGA GTTTTATTTA CGTCAGTTCG GGTATAAATT AGATTAA
 
Protein sequence
MNHSETHKAG FVSIIGRPNA GKSTLMNCLV GERLSIITPK AQTTRHRVMG IINDPEFQIV 
YSDTPGVIEP KYELQKSMMR FVDFSLEDAD MILWVLDVKD PEDHALVLQR LNNVEVPVLL
VLNKIDLSTQ EEIDALVEKW KAEFPKADSI LAVSALKNFN SDMVLKWVLS HLPQHPPFYD
KDELTDKPER FFASEIFREK IFKNYSKEIP YSSEVLIESF KDQKDLLRIQ AVIIVERDSQ
KGIVIGQGGE ALKRTATQAR KSMEEFFGKK VFLETFVKVE PDWRSKEFYL RQFGYKLD