Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3064 |
Symbol | |
ID | 4185862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3503449 |
End bp | 3504303 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638073053 |
Product | hypothetical protein |
Protein accession | YP_679647 |
Protein GI | 110639438 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2971] Predicted N-acetylglucosamine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.517649 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGCAA TCGTCGATAG TGGTTCTACA AAATCAAATT GGTTGTTCAC CGGTAAAAAG CCCGGCGAAG ATTTTTCTAT CCGTACTACC GGTATTAATC CGTATTATCA AACGGTAGAA GAAATACAGG AAGCACTGCA AAAAGAACTG GTACCAAATC TTCCGCAGAT CAGTTTAATT ACGGCGGTAT ACTTTTATGG TGCAGGCTGC GAATTGCCCG CACAGCAAGC AGTTGTAGCA CGTGCCATCT CTCCCCTGTT CAATAACTGC ATTGTACTTG TAGATAGCGA CCTGATTGCC GCTGCCCGTT CGGTACTTGG CGATGAAACA GGCATCTGCT GCATCAGCGG TACCGGGTCA AACACCTGTT ATTACGATGG CAAAAAGATC GTACGCAACA TCAATTCACT CGGTTTATAT ATGGGCGACG AAGGCAGCGG CGGCTTCTTA GGCAAGTTGC TGGCACGCGA TTATATCCGC GAATCGATGC CACTTGACAT ACGTGCACGC TTTGAAGTAT TTACTGCAGA TCGCAAAAGT GACATAATGG ACAAAGTATA TAAAAAACCT TTTCCAAACC GTTATCTGGC TTCACTTGCA CCTTTTGCCA TTCTGCATAA ATCGGATAAT TACATAAACG AATTGATCGA AGAGAATTTC CGTTTATTAT TTGACAACTG TATTTGCAGA TACGATGACT TTGAAAAACT ACCCGTGCGC TTTATTGGTT CTATTGGCTT GCATTTAAGA GATGCCTTAG AAAAAGTTGC GTCGGATAAA AAAGTCAAAA TTGATAAAAT TGTTGATGAC CCGATGCAAG GGTTAAAAGA ATATCATTTG AAACATACTG TATGA
|
Protein sequence | MIAIVDSGST KSNWLFTGKK PGEDFSIRTT GINPYYQTVE EIQEALQKEL VPNLPQISLI TAVYFYGAGC ELPAQQAVVA RAISPLFNNC IVLVDSDLIA AARSVLGDET GICCISGTGS NTCYYDGKKI VRNINSLGLY MGDEGSGGFL GKLLARDYIR ESMPLDIRAR FEVFTADRKS DIMDKVYKKP FPNRYLASLA PFAILHKSDN YINELIEENF RLLFDNCICR YDDFEKLPVR FIGSIGLHLR DALEKVASDK KVKIDKIVDD PMQGLKEYHL KHTV
|
| |