Gene CHU_3064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3064 
Symbol 
ID4185862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3503449 
End bp3504303 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content42% 
IMG OID638073053 
Producthypothetical protein 
Protein accessionYP_679647 
Protein GI110639438 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2971] Predicted N-acetylglucosamine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.517649 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCAA TCGTCGATAG TGGTTCTACA AAATCAAATT GGTTGTTCAC CGGTAAAAAG 
CCCGGCGAAG ATTTTTCTAT CCGTACTACC GGTATTAATC CGTATTATCA AACGGTAGAA
GAAATACAGG AAGCACTGCA AAAAGAACTG GTACCAAATC TTCCGCAGAT CAGTTTAATT
ACGGCGGTAT ACTTTTATGG TGCAGGCTGC GAATTGCCCG CACAGCAAGC AGTTGTAGCA
CGTGCCATCT CTCCCCTGTT CAATAACTGC ATTGTACTTG TAGATAGCGA CCTGATTGCC
GCTGCCCGTT CGGTACTTGG CGATGAAACA GGCATCTGCT GCATCAGCGG TACCGGGTCA
AACACCTGTT ATTACGATGG CAAAAAGATC GTACGCAACA TCAATTCACT CGGTTTATAT
ATGGGCGACG AAGGCAGCGG CGGCTTCTTA GGCAAGTTGC TGGCACGCGA TTATATCCGC
GAATCGATGC CACTTGACAT ACGTGCACGC TTTGAAGTAT TTACTGCAGA TCGCAAAAGT
GACATAATGG ACAAAGTATA TAAAAAACCT TTTCCAAACC GTTATCTGGC TTCACTTGCA
CCTTTTGCCA TTCTGCATAA ATCGGATAAT TACATAAACG AATTGATCGA AGAGAATTTC
CGTTTATTAT TTGACAACTG TATTTGCAGA TACGATGACT TTGAAAAACT ACCCGTGCGC
TTTATTGGTT CTATTGGCTT GCATTTAAGA GATGCCTTAG AAAAAGTTGC GTCGGATAAA
AAAGTCAAAA TTGATAAAAT TGTTGATGAC CCGATGCAAG GGTTAAAAGA ATATCATTTG
AAACATACTG TATGA
 
Protein sequence
MIAIVDSGST KSNWLFTGKK PGEDFSIRTT GINPYYQTVE EIQEALQKEL VPNLPQISLI 
TAVYFYGAGC ELPAQQAVVA RAISPLFNNC IVLVDSDLIA AARSVLGDET GICCISGTGS
NTCYYDGKKI VRNINSLGLY MGDEGSGGFL GKLLARDYIR ESMPLDIRAR FEVFTADRKS
DIMDKVYKKP FPNRYLASLA PFAILHKSDN YINELIEENF RLLFDNCICR YDDFEKLPVR
FIGSIGLHLR DALEKVASDK KVKIDKIVDD PMQGLKEYHL KHTV