Gene CHU_3047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3047 
SymbolcpxR 
ID4183430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3490399 
End bp3490806 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content36% 
IMG OID638073036 
Producttwo-component response regulator 
Protein accessionYP_679630 
Protein GI110639421 
COG category[T] Signal transduction mechanisms 
COG ID[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0882292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.419073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGA CTAAATTAAA TCAGATTTTT TTGATTGACG ATGATGAAGC AGTAAACTTC 
ATCAACAAAA TCATATTAAC TAAAACAGCT TGCGCAAATG AAATCATCGT ATTGCAAAGC
GCGCATAGGG CATTGGATAT ATTGTCTCAA AATGCGCAGA TAGATCCTGA CCGTCCGGAA
TTGATTTTTT TAGACATTAA TATGCCAGGC ATGGATGGAT GGGAATTCCT TGAAAAATAC
GCACAGCTTC CGCAGAATTA TATAACCAAC ATTAAAGTCA TTATGCTTAC AACCTCTGTA
AACCCTGAAC ACAGAAAGAG AGCAGAACAA TATAAAGAAG TTGCAGGCTT TCGTGTTAAA
CCCTTATCGA TGAAAATGGC GAGTGAAATA ATGGAAAGTT ATTTTTAA
 
Protein sequence
MTVTKLNQIF LIDDDEAVNF INKIILTKTA CANEIIVLQS AHRALDILSQ NAQIDPDRPE 
LIFLDINMPG MDGWEFLEKY AQLPQNYITN IKVIMLTTSV NPEHRKRAEQ YKEVAGFRVK
PLSMKMASEI MESYF