Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3030 |
Symbol | mltD |
ID | 4184963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3472150 |
End bp | 3473901 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638073019 |
Product | peptidoglycan lytic transglycosylase-related protein |
Protein accession | YP_679613 |
Protein GI | 110639404 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTACGTT TTATAATAGT AGCTTTTAGT ATTTGTTGTG CCGTTTTTAC ATGTAGTGCA CAAACATTCA CAAAGCCGTC AGTGCCTGAT GTAATTGAGT TTGCAGGAAT GAAACTGCAG TTAACCGCTG TTGCTAAAAG AAAAATAGAA GCAGACGTTA CCATGATTTT TGCAAGCGGT AAATACCTGC AGCAAAAAAT AGACCGCGCT AATTTATATT TCCCCATCAT TGAACGTATG TTTCATGAGG AAGGCATGCC TGAAGAGTTT AAATATTTAG CCTTGCAGGA ATCCAGCTTA GTGTCAGATG CGGTGTCCAG TTCTAATGCT GTCGGGTTTT GGCAATTTAA AAAAGAAACA GCCATTGAAG TAGGTGTGCA GGTAAATAGC CTGGTTGACG AGCGTAAGCA CATTTCATAT GCTTCCAGAG GCGCAGCGAA ATATTTAAAG AAAAATAATT TATTACTGGA TAACTGGGTA TATGCATTAT TATCTTATAA TGTTGGTCCG GGCGGTGTAA AGTCGCATGT GAAGCAGAAG TATGTTGGTG AGAAAAACAT GACCATTGAT GATGACATGC ATTGGTATGT GATTCGTTTT TTAGCGTATA AAATTGCCTA TGAAGATTTA GTAGGGCAGG CAAATCATCC CGATCTTTCT TTAATTGAAT CCAACGGTAT TAAAGATAAA ACGTTAACCG AAATTGCAAG GCAGGCCAAT GTAGAACTGG ATTTGTTGAA GGAATACAAC AAATGGTGCA CACAGGCACG TGTTCCGGGA GATAAAGAAT ATATTGTTAT CATTCCATCT GCACACGGCA CCAAACCTAA CATAGAAGTG TCTGCACCTG TAGCAGATGA GCCGGTAGTA AGTACAGGTT CGACTCCGAA GACCGTTGTA ATGCCAAAGA CGTTTCCGGA TATTAAAACG TACACGGATT CTATGAACAT CCCGATCTTT GTGGCTATTA ATAAAGTGAA GGCAATTAAA GCCGTAAAGG GTGATGATAT AAATTCTCTG ATTATAAAGT CTGGATTAAC AAAAAGTGCT TTTTTATATT TCAATGAAAT GAAAGGGTTT GAAACTGTTC AGCCGGGTAG TTTTTATTAT TTACAATTGA AACGAAAAAA AGCATTGGTT GCTTATCACA CGGTTTTAAA AGGAGAAACA ATAAATTCCA TTGCTCAAAA ATATGCTGTA ACAACAAACT CTATACGTAA GCATAACCGG CTTAGTAAAA AGGAAGCGGT TAAAGAAAAC AGAGTGTTGT GGTTGAGAGA TACACGTCCG GAGACAACAC CGATTGAATA TAAAACACCG CTGCCGGTAT ATGTTGAGCC TGTTCAAAAG AAACCTGTTG AAAAGGAAAC TGTAAAACCT GTTGTTAAAG AAACTCCGGT AATAACGCTT CCTGCTGCTG CTGCTGAAGC AAAAATAAAA CGCGATACGG TTTTTCATGT GGTGCAAAGC GGTGAGACTG TATTTGGTTT GTCCCGGAAA TATGAGATTG ATTCAGACAG TATCCGCGAA TGGAACCACC TGAATGGCTA CGCAATTCAA TTAAACCAGA AATTAATTGT TGGTTTCAAA TCAAAAGAGC GTCGGGAAAT TACACATGTT GTACAAACCG GTGAAACAGC TTATAAAATT TCAAAGCAAT ATAATGTTGG TACTGAGGAT ATTAAAAAAT GGAATGGCTT GCCAGATTAT AACCTTAAAC CGGGTCAGCA ATTAAAATTG TATATTCCCT AA
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Protein sequence | MLRFIIVAFS ICCAVFTCSA QTFTKPSVPD VIEFAGMKLQ LTAVAKRKIE ADVTMIFASG KYLQQKIDRA NLYFPIIERM FHEEGMPEEF KYLALQESSL VSDAVSSSNA VGFWQFKKET AIEVGVQVNS LVDERKHISY ASRGAAKYLK KNNLLLDNWV YALLSYNVGP GGVKSHVKQK YVGEKNMTID DDMHWYVIRF LAYKIAYEDL VGQANHPDLS LIESNGIKDK TLTEIARQAN VELDLLKEYN KWCTQARVPG DKEYIVIIPS AHGTKPNIEV SAPVADEPVV STGSTPKTVV MPKTFPDIKT YTDSMNIPIF VAINKVKAIK AVKGDDINSL IIKSGLTKSA FLYFNEMKGF ETVQPGSFYY LQLKRKKALV AYHTVLKGET INSIAQKYAV TTNSIRKHNR LSKKEAVKEN RVLWLRDTRP ETTPIEYKTP LPVYVEPVQK KPVEKETVKP VVKETPVITL PAAAAEAKIK RDTVFHVVQS GETVFGLSRK YEIDSDSIRE WNHLNGYAIQ LNQKLIVGFK SKERREITHV VQTGETAYKI SKQYNVGTED IKKWNGLPDY NLKPGQQLKL YIP
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