| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3017 |
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| Symbol | |
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| ID | 4184950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3459752 |
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| End bp | 3460549 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638073006 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_679600 |
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| Protein GI | 110639391 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGATTTT CTGTTTGCGC GCTGATTGTT TTTCTGCAAG TGTCTTGCGG TAAGTTTAAT
CATTTGCAAA AAACAGGTAC ACCTCAGGAA AAGTTAACTG CAGCCATTGA GTACTATAAC
AACGGTGATA ACTATAAAGC AGGTGTATTG CTGGAAGACA TAACTCCTAT TTTAAAAGGA
AAAGGAGAAG CAGAAACGGC GTTATATTAT TTGGCGAACA ATTATTATAA GCAAAAGCAA
TACATGATGA GCGCTTATTA CTTCAAGGAT TTTTATTTGA CTTATCCAAG AAGTAAATAT
GTAGAAGAAA CCATGTACAT GAATGTATAT TCGTTGTATC TGAACTCGCC TGAGTATAAT
CTGGATCAGA CAAGTACGTA TGATTGTTTA AAAGCAATGA CTACTTTTCT GACACGTTAT
CCGAAGACGA TTTATCTGGA TCAATGTAAT GCAATTGTTG ATGAACTGAA TGCAAAATTG
ATGCACAAGG CGTTTGAACA TTCCATGATG TATCATAAAG TAGGAAATTA TAAATCAGCG
GTTGTCGCTA TCGGCAACTT CGTTAATGAA TATCCCAATT CCATTTATGG GGAAAAAGCA
TACTTCACAC GTTTTACGTC TCAATATCAT TTAGCTAAAA ATAGTGTGGA AGGGAAAATT
CAGGAAGAAA GATATATACT TGCCATTGAG TTTTATCAGA TATTCATGGA TAAGTACCCT
ACTACCATTC ACAAAAAAGC TGCCAGCGAG ATGTATGATG ATATCATAAA GCGTTTGGAG
AAGATTAAAT TAAAATAA
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| Protein sequence | MRFSVCALIV FLQVSCGKFN HLQKTGTPQE KLTAAIEYYN NGDNYKAGVL LEDITPILKG
KGEAETALYY LANNYYKQKQ YMMSAYYFKD FYLTYPRSKY VEETMYMNVY SLYLNSPEYN
LDQTSTYDCL KAMTTFLTRY PKTIYLDQCN AIVDELNAKL MHKAFEHSMM YHKVGNYKSA
VVAIGNFVNE YPNSIYGEKA YFTRFTSQYH LAKNSVEGKI QEERYILAIE FYQIFMDKYP
TTIHKKAASE MYDDIIKRLE KIKLK
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