| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2985 |
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| Symbol | rsaD |
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| ID | 4185094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3420550 |
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| End bp | 3421323 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638072972 |
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| Product | ABC-type organic solvent transporter, ATP-binding protein |
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| Protein accession | YP_679568 |
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| Protein GI | 110639359 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.444132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAATA ACGCGCACAA AATAGATTAT AATGAAAAGG CCATTTCCAT TAAAGGGCTT
TATAAATCTT TTGGAGAGTT GCATGTACTG AAAGGGATTG ATCTTGAAGT GCATAAGGGA
GAAAACGTTG TTGTACTTGG AAAATCAGGA ACAGGAAAAT CTGTTTTAAT TAAAATATTG
GTTGGCTTAT TGAAACCGGA TGCCGGCGTT GTGCAGGTAT TGGGTAAAGA GGTTGATAAA
CTGAACCAGA AAGAATTAGA TGCACTGCGA TTACATATAG GTTTTGCTTT TCAAAGCAGT
GCTCTCTATG ATAGTATGGA TGTACGTCAG AATCTGGAAT TTCCTTTACT GATGAATTTT
AAAAATCTCA GCAAAGCAGA AGTTAAGGAT TCAGTGGAAG AAGTGCTTGA TGCTGTTGGT
TTGATTGATA AACTCAATCA GATGCCATCT GATTTGTCTG GCGGTCAGCG CAAGCGTATT
GGTATTGCAC GTACATTAAT TCTGAAGCCC AAGATTATGT TGTACGATGA GCCAACATCC
GGATTGGATC CGATTACATC TTTTGAAATA AACGAATTAA TAAATGAAGT TCAGGAGAAA
TATAACACCT CTTCAATCAT TATTACGCAT GATTTAACGT GTGCAAAAGA AACATGCGAT
CGTGTTGCCA TGTTATTAGA CGGAACTTTT GTGAAAACAG GTACTTTTGA AGAAGTATTT
GAAGATCAGG ATGAACGTAT ACAAAGTTTT TACAATTACA ATTTTATCAA ATAA
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| Protein sequence | MENNAHKIDY NEKAISIKGL YKSFGELHVL KGIDLEVHKG ENVVVLGKSG TGKSVLIKIL
VGLLKPDAGV VQVLGKEVDK LNQKELDALR LHIGFAFQSS ALYDSMDVRQ NLEFPLLMNF
KNLSKAEVKD SVEEVLDAVG LIDKLNQMPS DLSGGQRKRI GIARTLILKP KIMLYDEPTS
GLDPITSFEI NELINEVQEK YNTSSIIITH DLTCAKETCD RVAMLLDGTF VKTGTFEEVF
EDQDERIQSF YNYNFIK
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