| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2974 |
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| Symbol | paaF |
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| ID | 4186358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3406223 |
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| End bp | 3406999 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638072961 |
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| Product | methylglutaconyl-CoA hydratase |
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| Protein accession | YP_679557 |
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| Protein GI | 110639348 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.240508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATTTG TACAAACAAA CATCAGCGAT CGCATTGGTT ATGTTATTTT AAACCGCCCG
GAAAAAAGGA ATGCGTTGAA TTATCAATTT GTATCTGAGT TAAAAGAAAG CTTCCTCGCC
TTTTCAAAAA ATGATGCCGT AAAAGTTATT GTACTGAAAG CCGAAGGGGT AACGTTTTGT
GCCGGCGCTG ATCTGGAATA CCTGCAGCAG CTTCAAAACA ATACGTTTGA AGAAAATTTA
GCAGACTCTA CACATTTGAT GGAACTGTAC AAACTTATTT ACACACTTAA TAAAGTTGTT
ATTGCGCAGG TGAACGGCCA CGCGCTGGCG GGAGGCTGCG GGCTGGTAAG TGTCTGTGAT
TTTGCGTTCA GTATTCCCGA AGCAAACTTT GGCTACACCG AATCACGGAT CGGTTTTATA
CCGGCGATTG TCATGAATTT TCTTATTCAG AAAATCGGTG AAGCAAATGC CCGTATGATG
CTGTTAAGCG GCAATGTGAT CAAAGCACAG GATGCCTTGA ATTATGGCAT TATCAGTACC
ATTGTTGATG CCGAAGAAGA TCTGGAAGAA ACGGTTACAG GTTTTGCGCA GCATCTGATA
CTGAACAATT CAGGCACGTC TATGGAGCTA ACGAAACGCA TGCTTGCAGC TATTCAAAAC
ATGACCTTAG ACCAGGCATT GATCTATGCC GCTGAAATGA ACGCTGCGGC ACGCAGTTCA
GACGATTGTA AAAAAGGAAT CGCGGCGTTT TTAAATAAAG AAAATTTAAA ATGGTAA
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| Protein sequence | MEFVQTNISD RIGYVILNRP EKRNALNYQF VSELKESFLA FSKNDAVKVI VLKAEGVTFC
AGADLEYLQQ LQNNTFEENL ADSTHLMELY KLIYTLNKVV IAQVNGHALA GGCGLVSVCD
FAFSIPEANF GYTESRIGFI PAIVMNFLIQ KIGEANARMM LLSGNVIKAQ DALNYGIIST
IVDAEEDLEE TVTGFAQHLI LNNSGTSMEL TKRMLAAIQN MTLDQALIYA AEMNAAARSS
DDCKKGIAAF LNKENLKW
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