Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2938 |
Symbol | |
ID | 4185579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3359157 |
End bp | 3360656 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638072925 |
Product | hypothetical protein |
Protein accession | YP_679522 |
Protein GI | 110639313 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0338123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACTG GTCTATTATT AACATTATTA AATAAAACAA CATCACTTTC AGTTAATCAA AAGACTGGTA TTGAAGTTGT AAGCTGTACC TTTAATGATT TAATAAATAC CTTTCAAAAA GCTATTCCCA ATACTAATAT AAAAGGTCAG TTATGTATAC CAGAATATCA ACGACCATAT GTCTGGAAAG AAAAACAGAT CAATCGGCTT TTAGATGATT TTATTGAATA TTATAAAAAT ACGGATAATG ACAAACCACT TTTTTATTTA GGTAGCATAA TAGTACATAA GGATGAAGGC ACACTTAAAA TCATTGACGG ACAGCAACGA ATAACAACAT TATTGCTCAT CAATTCTATT ATCAATAAAG AAATTAAAAG TGGGATTCAA TATACTTCTA CTACCAGCAT CAATAATATA AAACGCAATT TTTCTTACCT TAAAAGTGTA CACGCAAAAG ATGTTTTTGA TTATGCCGAT ACAGAAGTCC TCAACTATAT TGATTTTGAT AAAATTAATG TAACGTTGGT AGTTACTGCT ACCGAAGATT TAGCCTATAC TTTTTTTGAA ACTCAGAATA CAGGAGGTGT TCGATTGAGT GGTTCTGATA TAATAAAGGC ACATCATTTA CGAGCCATTT CTTCTGAAAA AAATATAAAT TATCAGGCCC GAAAATGGGA AGGCATCGAA AGTGAAAAAA TAGAAAGTAT CATTCAAAAT CTTACTAAAA TAAGATTTTG GGATAACAGA AATTGGCGCA GGTTCCCTTT TTACAGAGAT GAAAAAGGAA TAAAGGAAGT CTTAATTGAA GAATTTACTG AAAATACAAA ACACGACAAG GAAGATATTT CATTTTATTA TAGTGCTGTA AAAATGGAGG CTGGCAGGGC ATTTCAAATG CATGAAAGCA ACTATAAGCA ACTAAAGCAA CCTTTGTCGG ATGGTAATAA TACTCTTGAT TATATCAATG ATTATGTGCA CTTACACGAT GTACTATTCA ATAGAAGCAA AAAAGATTAC AGAGTAAGCG ATGCTTTTTA TGATTTTAAC GAAAAGTTGA TGCATGGCAA TTCGGGCACA TTGTTCTTAA AAGAGTTGTT AGAAATTTGC ATTATCACTT ATGTAAGCCG TTTTGGATTT TACCGCTTAT TTGAAGCCAG TTTATGGTTA TATCGTTCTA TTTATTCGCT AAGGGTTTCT TCAAGTAGAA ACGTTAGAGA GGATAGCATT TTCAAATTCG TTTTTGAAAA TCAATTTATT GATAATATCA TTGAAGTTTA TACAGTAGAT GAACTCATTT TATATCTAAA AAGATTTAAG TACACCTTTA ATACTGACAA TTTAGGAGTG AAAGAATCAA AAGATAAGCA CATTGGTTCA TTGAATAATT ATTTTAATGA GTTTGGTAAA ACAGAAGATT TCAAGAAAAC TCCAAAAGCT TTTGACAAAG CTTTTTTAAC TGCCATTGTA ACTAAAATTA AAGAAAACAA TGAGCAATAA
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Protein sequence | METGLLLTLL NKTTSLSVNQ KTGIEVVSCT FNDLINTFQK AIPNTNIKGQ LCIPEYQRPY VWKEKQINRL LDDFIEYYKN TDNDKPLFYL GSIIVHKDEG TLKIIDGQQR ITTLLLINSI INKEIKSGIQ YTSTTSINNI KRNFSYLKSV HAKDVFDYAD TEVLNYIDFD KINVTLVVTA TEDLAYTFFE TQNTGGVRLS GSDIIKAHHL RAISSEKNIN YQARKWEGIE SEKIESIIQN LTKIRFWDNR NWRRFPFYRD EKGIKEVLIE EFTENTKHDK EDISFYYSAV KMEAGRAFQM HESNYKQLKQ PLSDGNNTLD YINDYVHLHD VLFNRSKKDY RVSDAFYDFN EKLMHGNSGT LFLKELLEIC IITYVSRFGF YRLFEASLWL YRSIYSLRVS SSRNVREDSI FKFVFENQFI DNIIEVYTVD ELILYLKRFK YTFNTDNLGV KESKDKHIGS LNNYFNEFGK TEDFKKTPKA FDKAFLTAIV TKIKENNEQ
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